Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNU6-334P-201ENST00000517072 102 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC068339.2-201ENST00000534395 618 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 TOMM20P1-201ENST00000534518 427 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC104072.1-201ENST00000568817 668 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 BNIP3P39-201ENST00000601077 554 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 BUB1P1-201ENST00000603541 607 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 CYCSP1-201ENST00000604815 315 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC111152.1-202ENST00000635848 339 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 MIR1910-201ENST00000636955 80 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 ASNSP6-201ENST00000592770 1618 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 NEK2P4-201ENST00000425793 1329 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AL512310.3-201ENST00000547023 1335 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AP000547.3-204ENST00000588548 2523 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 MAPK10-261ENST00000641050 3109 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 CYP2G2P-201ENST00000594920 1485 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 TMCC1P1-201ENST00000518897 1980 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 RPL11P4-201ENST00000332269 436 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 RN7SKP237-201ENST00000364663 301 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 RNA5SP279-201ENST00000365513 117 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC092642.1-201ENST00000392417 425 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC099782.1-201ENST00000425889 474 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC018638.3-201ENST00000461273 132 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC021006.1-201ENST00000489849 553 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 GM2AP2-201ENST00000491764 562 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 RNA5SP418-201ENST00000515951 117 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 RNA5SP441-201ENST00000516809 88 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL133399.1-201ENST00000527476 298 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL078601.3-201ENST00000573303 535 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC133794.1-201ENST00000602731 914 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AP000240.1-201ENST00000609910 452 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC018926.1-201ENST00000616335 435 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL356274.1-201ENST00000617064 410 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 OR1N1-202ENST00000619659 939 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC022306.3-201ENST00000619930 550 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL049777.1-201ENST00000622740 518 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AP001052.1-201ENST00000626421 99 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL590396.2-201ENST00000636511 1041 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 LINC02495-203ENST00000636704 242 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC127070.3-201ENST00000503695 3263 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms