Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC092133.1-201ENST00000565828 719 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 RPS7P1-201ENST00000571702 585 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AL356055.1-201ENST00000602528 446 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC008385.1-201ENST00000604421 355 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC009237.12-201ENST00000604755 742 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC090186.1-201ENST00000605991 572 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC135050.6-202ENST00000613584 392 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 SNX18P10-201ENST00000625014 519 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AL139254.2-202ENST00000641937 1156 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC022034.1-201ENST00000512867 2156 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 OR6M2P-202ENST00000641780 2063 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC087359.1-201ENST00000508335 1740 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 PRNCR1-201ENST00000635449 12727 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 U3.4-201ENST00000363352 213 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 RNU6-1200P-201ENST00000384162 107 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 RNA5SP18-201ENST00000390935 121 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 IGLC6-201ENST00000410078 317 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 RN7SKP263-201ENST00000411194 309 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 STSP1-201ENST00000412493 1151 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AL161449.1-201ENST00000414531 1199 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 CDK8P2-201ENST00000415020 547 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 RPL34P27-201ENST00000428810 349 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AL139415.2-201ENST00000431968 163 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 EIF3IP1-201ENST00000433048 967 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AL606752.1-201ENST00000435442 666 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AL591503.2-201ENST00000442314 1005 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AL590004.3-202ENST00000445883 451 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 RNU6-956P-201ENST00000458868 103 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 RPS18P13-201ENST00000461260 454 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 RN7SL775P-201ENST00000498361 336 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC084024.2-201ENST00000503480 791 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC021220.1-201ENST00000507445 630 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC026782.2-201ENST00000510845 636 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC026700.1-201ENST00000512074 544 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AL135978.1-201ENST00000553618 1266 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC136619.2-201ENST00000563361 631 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.98□□□□□ -1.29
SSU72Q9NP77 AC116553.2-201ENST00000564203 463 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 ACTG1P15-201ENST00000570019 1063 ntBASIC6.98□□□□□ -1.29
SSU72Q9NP77 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms