Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 YAP1P2-201ENST00000455104 610 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC008026.1-201ENST00000460492 447 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RPL5P33-201ENST00000487833 905 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-430P-201ENST00000517078 107 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 PTTG3P-201ENST00000521862 606 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 OR5M4P-201ENST00000529436 925 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC005552.1-201ENST00000577556 662 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC007952.7-201ENST00000583141 757 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 BNIP3P9-201ENST00000603714 553 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL161729.4-201ENST00000604650 476 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC090525.3-201ENST00000605601 189 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL359880.1-201ENST00000621879 266 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC120349.2-201ENST00000625002 298 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL034408.1-201ENST00000637712 664 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AL121835.2-201ENST00000624253 3502 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 PWRN1-212ENST00000569908 1435 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 TAC1-203ENST00000350485 975 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-582P-201ENST00000362989 107 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 SNORD116-23-201ENST00000384645 92 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MT-TL1-201ENST00000386347 75 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-1009P-201ENST00000390996 107 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MTCO3P40-201ENST00000392516 676 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC025750.1-201ENST00000399891 379 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 NPM1P38-201ENST00000403835 865 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MIR1269A-201ENST00000408636 105 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 RN7SKP136-201ENST00000410927 300 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC109780.2-201ENST00000413467 845 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 TMBIM7P-201ENST00000418074 855 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC239367.1-201ENST00000439389 936 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 UBE2V1P5-201ENST00000440070 405 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC123904.1-201ENST00000441072 368 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 OR7E125P-201ENST00000443450 846 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 DPPA3P1-201ENST00000448050 469 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 RPL26P28-201ENST00000451325 435 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 DAZAP2P1-201ENST00000475212 503 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms