Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC068313.1-201ENST00000604028 1008 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC124916.2-201ENST00000604416 224 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 MAPK10-350ENST00000641777 965 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AL354854.1-201ENST00000455940 1363 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC020656.2-201ENST00000613291 5309 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 TTC41P-205ENST00000551270 3963 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 RBBP4P5-201ENST00000398583 1266 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 TRIM60P16-201ENST00000444048 694 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 HMGB1P7-201ENST00000450921 612 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC104164.1-201ENST00000460282 590 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 RN7SL254P-201ENST00000460609 284 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 RPL5P12-201ENST00000477071 851 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 RPL38P3-201ENST00000484463 213 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 EIF4E2P2-201ENST00000492033 736 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC110760.3-202ENST00000515177 371 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC110056.1-201ENST00000525759 911 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AP003080.1-202ENST00000526526 915 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 CR383656.14-201ENST00000551951 406 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AL136520.1-202ENST00000555494 763 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 HNRNPCP1-201ENST00000556181 766 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC004908.3-201ENST00000610248 625 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC009269.6-201ENST00000621778 588 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AL139254.3-201ENST00000641097 674 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AC008627.1-201ENST00000517511 1704 ntBASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
ZNF549Q6P9A3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 MTCO1P28-201ENST00000574177 1528 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 RN7SKP77-201ENST00000363261 353 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 MIR130B-202ENST00000385018 82 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms