Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 RPS3AP53-201ENST00000454716 778 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AC015864.1-201ENST00000496512 544 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 TPM3P3-201ENST00000521343 354 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AC063949.1-201ENST00000552900 865 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AC025574.2-201ENST00000615621 514 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AC087385.3-201ENST00000620477 187 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 ABCA11P-202ENST00000504019 2110 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AC002090.1-201ENST00000625000 2138 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 AP004289.1-201ENST00000436307 2205 ntBASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SNAPC4Q5SXM2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 MITF-203ENST00000328528 4680 ntTSL 5 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 THAP12P9-201ENST00000503971 2360 ntBASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 AL356967.1-201ENST00000406305 431 ntBASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 DSTNP5-201ENST00000427921 523 ntBASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 RNU6-941P-201ENST00000516346 108 ntBASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 BRD9P1-201ENST00000529855 560 ntBASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 ZNF101P1-201ENST00000435701 1720 ntBASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.31□□□□□ -0.92
SNAPC4Q5SXM2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 AC114947.2-201ENST00000565748 2125 ntBASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 AC092106.1-201ENST00000444291 373 ntBASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 OR13K1P-201ENST00000444577 975 ntBASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 AC092324.1-201ENST00000468671 324 ntBASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 RPL5P22-201ENST00000480199 884 ntBASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 AC078878.1-201ENST00000539832 958 ntBASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SNAPC4Q5SXM2 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms