Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 MIR132-201ENST00000591554 101 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AC137695.1-201ENST00000604126 489 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AP000866.6-201ENST00000638898 3579 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 GTF2IP4-201ENST00000453092 2054 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 Z83820.1-201ENST00000456978 1499 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 AC119674.1-213ENST00000641177 1386 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 RNU6-171P-201ENST00000384354 107 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 OR3A2-201ENST00000408891 1076 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 GABARAPL3-201ENST00000412799 354 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 BMS1P17-202ENST00000416720 316 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 MARK2P12-201ENST00000420129 585 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 AL663074.2-201ENST00000440621 479 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 RN7SL352P-201ENST00000466002 277 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 RPS17P15-201ENST00000475609 349 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 MRPS16P1-201ENST00000523462 412 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 AC051619.2-201ENST00000559063 397 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 AC018558.5-201ENST00000565840 952 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 AC119501.1-201ENST00000603646 475 ntBASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.87□□□□□ -1.31
SHROOM1Q2M3G4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC034229.2-201ENST00000566945 2508 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 CR788268.1-201ENST00000603931 1809 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AL159987.1-201ENST00000347911 293 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 RN7SKP166-201ENST00000410812 305 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 TMA16P2-201ENST00000413187 601 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 DEFA9P-201ENST00000433042 285 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 RAB28P2-201ENST00000454299 641 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 RN7SL184P-201ENST00000488308 297 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 HMGB1P42-201ENST00000532126 553 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC016180.1-201ENST00000567945 403 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 MIR1273E-201ENST00000581165 102 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC145423.1-201ENST00000605712 336 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AL359513.1-201ENST00000614364 557 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 CU639417.4-201ENST00000623928 207 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC016542.2-201ENST00000624201 619 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC022034.1-201ENST00000512867 2156 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 AC012078.1-201ENST00000405035 1646 ntBASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SHROOM1Q2M3G4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 246.4 ms