Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AP003486.1-201ENST00000525716 3994 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AL121657.1-201ENST00000327215 531 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 RNU6-236P-201ENST00000363886 106 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 RNA5SP433-201ENST00000364491 114 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 Y_RNA.356-201ENST00000365475 113 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC004448.2-201ENST00000422360 586 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC095038.1-201ENST00000429248 1591 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC013410.1-201ENST00000436223 1232 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 FANCD2P2-201ENST00000437591 1400 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 PA2G4P6-201ENST00000438325 1197 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 GTF3AP5-201ENST00000442645 697 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 MTND5P1-201ENST00000445440 1375 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC015820.1-201ENST00000473882 321 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AP002884.1-201ENST00000479691 655 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC013828.1-201ENST00000481845 158 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC109486.1-201ENST00000486833 374 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 RPS27P20-201ENST00000492051 246 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 FTH1P23-201ENST00000492727 550 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 DCAF13P2-201ENST00000514188 555 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC130364.2-201ENST00000528639 604 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AP000916.1-201ENST00000533869 835 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 PDCD5P1-201ENST00000543528 309 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AL031846.1-201ENST00000560933 314 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 MIR3680-2-201ENST00000578247 87 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 MIR3680-1-201ENST00000581433 87 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 RPL7AP69-201ENST00000595306 806 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AP001437.1-201ENST00000608783 456 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AC127024.8-201ENST00000623719 2094 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 MAPK10-285ENST00000641207 2746 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 RNU6-254P-201ENST00000363377 107 ntBASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 Y_RNA.216-201ENST00000364205 93 ntBASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 RNA5SP152-201ENST00000365184 110 ntBASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 MIR421-201ENST00000365696 85 ntBASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 Y_RNA.450-201ENST00000384198 113 ntBASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 Y_RNA.453-201ENST00000384223 109 ntBASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 AL079341.1-201ENST00000404701 1207 ntBASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 AC002524.1-201ENST00000411687 547 ntBASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.13□□□□□ -1.27
RSPO4Q2I0M5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms