Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.06□□□□□ -1.12
PTCH1Q13635 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PTCH1Q13635 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PTCH1Q13635 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.05□□□□□ -1.12
PTCH1Q13635 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.05□□□□□ -1.12
PTCH1Q13635 RNA5SP339-201ENST00000390987 122 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 AL645733.1-201ENST00000402250 217 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 OR52B5P-201ENST00000435337 951 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 AC006335.2-201ENST00000437993 330 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 AL162739.1-201ENST00000450606 307 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.05□□□□□ -1.12
PTCH1Q13635 RN7SL352P-201ENST00000466002 277 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 RPL15P21-201ENST00000495592 567 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.05□□□□□ -1.12
PTCH1Q13635 OR8G3P-201ENST00000533406 921 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.05□□□□□ -1.12
PTCH1Q13635 AC126177.5-201ENST00000549599 178 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 AL049779.2-201ENST00000553847 315 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.05□□□□□ -1.12
PTCH1Q13635 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.05□□□□□ -1.12
PTCH1Q13635 MRPS21P7-201ENST00000566937 238 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.05□□□□□ -1.12
PTCH1Q13635 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.05□□□□□ -1.12
PTCH1Q13635 OR52B5P-202ENST00000641118 1110 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 CASC19-243ENST00000641588 1546 ntBASIC8.05□□□□□ -1.12
PTCH1Q13635 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTCH1Q13635 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.05□□□□□ -1.12
PTCH1Q13635 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTCH1Q13635 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
PTCH1Q13635 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTCH1Q13635 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PTCH1Q13635 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.04□□□□□ -1.12
PTCH1Q13635 RNA5SP319-201ENST00000362768 119 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 RMRPP5-201ENST00000411156 267 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 AC005033.1-201ENST00000428904 813 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 AURKAPS1-201ENST00000451805 1212 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 RPS4XP1-201ENST00000482189 787 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 RPS21P4-201ENST00000487122 248 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.04□□□□□ -1.12
PTCH1Q13635 AC090638.1-201ENST00000498296 909 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 RPEP1-201ENST00000504507 658 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.04□□□□□ -1.12
PTCH1Q13635 CYP4F27P-201ENST00000514557 494 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 AC021678.3-201ENST00000517893 476 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 CR383656.6-201ENST00000550518 394 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 HNRNPCP1-201ENST00000556181 766 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.04□□□□□ -1.12
PTCH1Q13635 TAS2R6P-201ENST00000605022 826 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 AC004836.1-201ENST00000623032 634 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 AP000550.3-201ENST00000637734 379 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
PTCH1Q13635 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTCH1Q13635 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.04□□□□□ -1.12
PTCH1Q13635 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
PTCH1Q13635 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
PTCH1Q13635 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
PTCH1Q13635 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTCH1Q13635 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PTCH1Q13635 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTCH1Q13635 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTCH1Q13635 AC006213.6-201ENST00000623722 4179 ntBASIC8.04□□□□□ -1.12
PTCH1Q13635 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTCH1Q13635 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTCH1Q13635 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
PTCH1Q13635 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.03□□□□□ -1.12
PTCH1Q13635 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 RPL7P61-201ENST00000451721 751 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AL022319.1-201ENST00000458183 1167 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 DAP3-209ENST00000465375 729 ntTSL 2 BASIC8.03□□□□□ -1.12
PTCH1Q13635 BX284632.1-201ENST00000478218 541 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8.03□□□□□ -1.12
PTCH1Q13635 PGAM1P13-201ENST00000507497 754 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AC126615.2-201ENST00000553003 515 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms