Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 OR52E3P-201ENST00000452083 936 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 AL034369.1-201ENST00000453808 477 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AC084754.1-201ENST00000463466 464 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 RN7SL216P-201ENST00000471607 298 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 RN7SL187P-201ENST00000495587 303 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.35□□□□□ -1.23
SOX4Q06945 AC008565.1-201ENST00000509046 885 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 SNX18P23-201ENST00000510867 677 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 RN7SKP5-201ENST00000517045 272 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 OR4A6P-201ENST00000534364 970 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 AP005205.1-201ENST00000563503 508 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 AC022662.1-201ENST00000580252 331 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 AC183089.2-201ENST00000637931 916 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 NCLP2-201ENST00000416078 1462 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 HSPD1P11-201ENST00000508643 1702 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 CASC19-205ENST00000641013 1411 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC010132.4-201ENST00000569883 1368 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX4Q06945 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SOX4Q06945 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX4Q06945 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX4Q06945 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX4Q06945 AC010894.1-201ENST00000313760 361 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SOX4Q06945 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SOX4Q06945 RN7SKP184-201ENST00000362348 333 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SOX4Q06945 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX4Q06945 RPS3AP24-201ENST00000407896 734 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 RNU2-16P-201ENST00000410712 136 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX4Q06945 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX4Q06945 DPRXP1-201ENST00000426312 460 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 MTCO2P19-201ENST00000427513 598 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 RBMX2P4-201ENST00000441256 376 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 MTCO1P19-201ENST00000443487 500 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 AL590004.3-202ENST00000445883 451 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 AL671855.1-201ENST00000446875 1203 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX4Q06945 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX4Q06945 KF459542.1-201ENST00000450908 553 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 AC099340.1-201ENST00000475247 599 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 RPL23AP44-201ENST00000482216 473 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 EIF4E2P2-201ENST00000492033 736 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX4Q06945 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX4Q06945 RN7SKP196-201ENST00000516267 345 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 Y_RNA.695-201ENST00000516715 107 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX4Q06945 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX4Q06945 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX4Q06945 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX4Q06945 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX4Q06945 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC009237.12-201ENST00000604755 742 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 AC005377.1-201ENST00000605126 456 ntBASIC7.34□□□□□ -1.23
SOX4Q06945 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX4Q06945 AC138749.5-201ENST00000611461 208 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms