Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC135626.1-201ENST00000556983 435 ntBASIC7.65□□□□□ -1.18
RIPK4P57078 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.65□□□□□ -1.18
RIPK4P57078 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.65□□□□□ -1.18
RIPK4P57078 AC015802.2-201ENST00000589690 189 ntBASIC7.65□□□□□ -1.18
RIPK4P57078 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.65□□□□□ -1.18
RIPK4P57078 AL049840.6-201ENST00000604583 345 ntBASIC7.65□□□□□ -1.18
RIPK4P57078 AC026124.2-201ENST00000621847 656 ntBASIC7.65□□□□□ -1.18
RIPK4P57078 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.65□□□□□ -1.18
RIPK4P57078 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
RIPK4P57078 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RIPK4P57078 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.65□□□□□ -1.19
RIPK4P57078 AC087516.1-201ENST00000561236 2428 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RIPK4P57078 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.64□□□□□ -1.19
RIPK4P57078 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 NCOA4P2-201ENST00000340589 1813 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.64□□□□□ -1.19
RIPK4P57078 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.64□□□□□ -1.19
RIPK4P57078 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RIPK4P57078 MIR375-201ENST00000362103 64 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 SNORD1C-201ENST00000363315 78 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RIPK4P57078 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 RNA5SP122-201ENST00000384457 108 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 AL357752.1-201ENST00000412817 349 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.64□□□□□ -1.19
RIPK4P57078 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.64□□□□□ -1.19
RIPK4P57078 RPS3AP38-201ENST00000435889 763 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 DNAJC19P5-201ENST00000443295 316 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 AC004129.2-201ENST00000457229 287 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.64□□□□□ -1.19
RIPK4P57078 TRBV5-2-201ENST00000489095 273 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.64□□□□□ -1.19
RIPK4P57078 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.64□□□□□ -1.19
RIPK4P57078 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.64□□□□□ -1.19
RIPK4P57078 AC139365.2-201ENST00000517972 253 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 AC079600.1-201ENST00000550326 297 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.64□□□□□ -1.19
RIPK4P57078 MIR4420-201ENST00000583944 77 ntBASIC7.64□□□□□ -1.19
RIPK4P57078 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.64□□□□□ -1.19
RIPK4P57078 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
RIPK4P57078 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
RIPK4P57078 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
RIPK4P57078 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
RIPK4P57078 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.64□□□□□ -1.19
RIPK4P57078 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.64□□□□□ -1.19
RIPK4P57078 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RIPK4P57078 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.63□□□□□ -1.19
RIPK4P57078 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.63□□□□□ -1.19
RIPK4P57078 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 FBXL21-201ENST00000297158 1305 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RIPK4P57078 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.63□□□□□ -1.19
RIPK4P57078 CDY17P-201ENST00000414121 1282 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.63□□□□□ -1.19
RIPK4P57078 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.63□□□□□ -1.19
RIPK4P57078 AC127526.2-201ENST00000426436 775 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 AC104843.2-201ENST00000427666 297 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 HMGB3P24-201ENST00000433260 622 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.63□□□□□ -1.19
RIPK4P57078 SUMO2P3-201ENST00000438311 288 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.63□□□□□ -1.19
RIPK4P57078 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 OSTCP1-201ENST00000455507 450 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 RPSAP37-201ENST00000470913 821 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 NENFP3-201ENST00000503735 313 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 MTATP6P1-201ENST00000514057 681 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 SCARNA6.1-201ENST00000516989 238 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 AC078899.1-201ENST00000521432 1185 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.63□□□□□ -1.19
RIPK4P57078 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 AL031658.2-201ENST00000616850 651 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 AC015799.1-201ENST00000622996 3122 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
RIPK4P57078 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 AP004607.3-201ENST00000530354 3915 ntBASIC7.63□□□□□ -1.19
RIPK4P57078 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RIPK4P57078 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RIPK4P57078 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms