Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 RNU6-276P-201ENST00000516114 96 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC084337.1-201ENST00000524809 686 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 NPM1P35-201ENST00000533043 868 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.93□□□□□ -1.46
SUMO3P55854 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC018618.2-201ENST00000604770 446 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 AC019257.2-201ENST00000605539 497 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 AL513218.1-201ENST00000606527 391 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SUMO3P55854 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 AL132640.2-201ENST00000559968 1698 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 ZNF733P-202ENST00000444809 1573 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 PABPC1P8-201ENST00000452851 2086 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 FANCD2P2-201ENST00000437591 1400 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 AC217777.1-201ENST00000570034 1471 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SUMO3P55854 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 VIM2P-201ENST00000402383 1294 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.92□□□□□ -1.46
SUMO3P55854 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 ETF1P3-201ENST00000430422 1160 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 GAPDHP19-201ENST00000431768 1005 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AL451136.1-201ENST00000435399 325 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 SOCS5P1-201ENST00000440415 949 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 PPIAP32-201ENST00000449940 472 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AL096803.2-201ENST00000450032 677 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 Z95152.1-201ENST00000453556 656 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 RN7SL413P-201ENST00000482700 297 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.92□□□□□ -1.46
SUMO3P55854 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 AC113191.1-201ENST00000517759 403 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 OR8G5-201ENST00000524943 1041 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.92□□□□□ -1.46
SUMO3P55854 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.92□□□□□ -1.46
SUMO3P55854 MIR4301-201ENST00000577203 66 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.92□□□□□ -1.46
SUMO3P55854 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.92□□□□□ -1.46
SUMO3P55854 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.92□□□□□ -1.46
SUMO3P55854 CLIC4P2-201ENST00000601934 717 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 CYCSP1-201ENST00000604815 315 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AL683813.2-201ENST00000605245 502 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AP004607.9-201ENST00000618202 316 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 MIR6085-201ENST00000618314 110 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.92□□□□□ -1.46
SUMO3P55854 AC211486.4-201ENST00000621495 113 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms