Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 OR11H2-202ENST00000641517 1085 ntBASIC6.09□□□□□ -1.43
CDH6P55285 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CDH6P55285 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH6P55285 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDH6P55285 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.09□□□□□ -1.44
CDH6P55285 AC099654.3-201ENST00000447087 1546 ntBASIC6.09□□□□□ -1.44
CDH6P55285 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.09□□□□□ -1.44
CDH6P55285 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDH6P55285 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CDH6P55285 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH6P55285 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH6P55285 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH6P55285 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.08□□□□□ -1.44
CDH6P55285 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH6P55285 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDH6P55285 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDH6P55285 AC016739.1-201ENST00000405359 345 ntBASIC6.08□□□□□ -1.44
CDH6P55285 AL354890.1-201ENST00000413730 346 ntBASIC6.08□□□□□ -1.44
CDH6P55285 CRIP1P1-201ENST00000427567 185 ntBASIC6.08□□□□□ -1.44
CDH6P55285 AC069154.1-201ENST00000432914 542 ntBASIC6.08□□□□□ -1.44
CDH6P55285 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH6P55285 TUBB4BP6-201ENST00000437576 479 ntBASIC6.08□□□□□ -1.44
CDH6P55285 Z83838.1-202ENST00000456225 839 ntBASIC6.08□□□□□ -1.44
CDH6P55285 AC004129.2-201ENST00000457229 287 ntBASIC6.08□□□□□ -1.44
CDH6P55285 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH6P55285 AC093719.1-201ENST00000480427 441 ntBASIC6.08□□□□□ -1.44
CDH6P55285 ST13P12-201ENST00000508958 1094 ntBASIC6.08□□□□□ -1.44
CDH6P55285 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH6P55285 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH6P55285 SCARNA18.1-201ENST00000516330 83 ntBASIC6.08□□□□□ -1.44
CDH6P55285 RNA5SP340-201ENST00000517132 107 ntBASIC6.08□□□□□ -1.44
CDH6P55285 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.08□□□□□ -1.44
CDH6P55285 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH6P55285 AL121594.2-201ENST00000541658 472 ntBASIC6.08□□□□□ -1.44
CDH6P55285 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH6P55285 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH6P55285 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH6P55285 AL513327.3-201ENST00000602618 469 ntBASIC6.08□□□□□ -1.44
CDH6P55285 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH6P55285 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH6P55285 LYARP1-201ENST00000436977 1501 ntBASIC6.08□□□□□ -1.44
CDH6P55285 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH6P55285 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CDH6P55285 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH6P55285 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CDH6P55285 MFSD8-219ENST00000641228 2559 ntBASIC6.08□□□□□ -1.44
CDH6P55285 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH6P55285 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH6P55285 AF287957.1-201ENST00000607368 1595 ntBASIC6.07□□□□□ -1.44
CDH6P55285 RN7SKP78-201ENST00000364711 318 ntBASIC6.07□□□□□ -1.44
CDH6P55285 RNU2-18P-201ENST00000411224 162 ntBASIC6.07□□□□□ -1.44
CDH6P55285 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH6P55285 AC021876.1-201ENST00000425959 359 ntBASIC6.07□□□□□ -1.44
CDH6P55285 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH6P55285 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH6P55285 RPL12P39-201ENST00000455456 496 ntBASIC6.07□□□□□ -1.44
CDH6P55285 CST12P-201ENST00000457644 362 ntBASIC6.07□□□□□ -1.44
CDH6P55285 AP002884.1-201ENST00000479691 655 ntBASIC6.07□□□□□ -1.44
CDH6P55285 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH6P55285 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH6P55285 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH6P55285 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH6P55285 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH6P55285 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH6P55285 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH6P55285 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH6P55285 AL163952.1-202ENST00000569625 600 ntBASIC6.07□□□□□ -1.44
CDH6P55285 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDH6P55285 MIR4776-2-201ENST00000580204 80 ntBASIC6.07□□□□□ -1.44
CDH6P55285 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH6P55285 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH6P55285 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH6P55285 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.07□□□□□ -1.44
CDH6P55285 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH6P55285 AC011933.2-201ENST00000578539 2790 ntBASIC6.07□□□□□ -1.44
CDH6P55285 TTC41P-205ENST00000551270 3963 ntBASIC6.07□□□□□ -1.44
CDH6P55285 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CDH6P55285 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH6P55285 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH6P55285 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH6P55285 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH6P55285 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CDH6P55285 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 AP000432.2-201ENST00000624164 2048 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms