Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 AC136624.1-201ENST00000400791 413 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 RNU4-34P-201ENST00000410431 124 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 RN7SKP161-201ENST00000411110 305 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK1P53667 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 OR3D1P-201ENST00000438288 955 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 AC092824.1-201ENST00000483524 576 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 RN7SL714P-201ENST00000487050 298 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 AC113398.2-201ENST00000507630 558 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.16□□□□□ -1.42
LIMK1P53667 AP003080.1-202ENST00000526526 915 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 AC234775.3-201ENST00000564612 656 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 AC037198.3-201ENST00000616754 526 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 AC116667.2-201ENST00000641075 823 ntBASIC6.16□□□□□ -1.42
LIMK1P53667 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK1P53667 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.16□□□□□ -1.42
LIMK1P53667 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.16□□□□□ -1.42
LIMK1P53667 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK1P53667 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.16□□□□□ -1.42
LIMK1P53667 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK1P53667 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
LIMK1P53667 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LIMK1P53667 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
LIMK1P53667 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK1P53667 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK1P53667 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMK1P53667 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK1P53667 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMK1P53667 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
LIMK1P53667 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK1P53667 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
LIMK1P53667 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK1P53667 HSPD1P8-201ENST00000400121 1658 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 TMSB4XP2-201ENST00000335179 210 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LIMK1P53667 RN7SKP162-201ENST00000363605 345 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK1P53667 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LIMK1P53667 RN7SKP216-201ENST00000411050 312 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK1P53667 AC245096.1-201ENST00000413104 546 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 AC096537.2-201ENST00000413707 714 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.15□□□□□ -1.42
LIMK1P53667 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK1P53667 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMK1P53667 AL512637.1-201ENST00000439523 1231 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMK1P53667 REG1CP-206ENST00000447469 496 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMK1P53667 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK1P53667 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK1P53667 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK1P53667 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMK1P53667 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK1P53667 AC084337.1-201ENST00000524809 686 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 AC023245.2-201ENST00000530760 2978 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK1P53667 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
LIMK1P53667 AC044860.2-201ENST00000561005 179 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMK1P53667 AC005244.1-201ENST00000582566 339 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 AC005332.4-201ENST00000592752 579 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK1P53667 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMK1P53667 RFPL4AP6-201ENST00000616792 846 ntBASIC6.15□□□□□ -1.42
LIMK1P53667 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK1P53667 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMK1P53667 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMK1P53667 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.15□□□□□ -1.43
LIMK1P53667 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.15□□□□□ -1.43
LIMK1P53667 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.15□□□□□ -1.43
LIMK1P53667 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LIMK1P53667 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LIMK1P53667 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LIMK1P53667 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.15□□□□□ -1.43
LIMK1P53667 AC093297.3-201ENST00000607056 2517 ntBASIC6.15□□□□□ -1.43
LIMK1P53667 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
LIMK1P53667 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LIMK1P53667 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms