Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
BRCA2P51587 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCA2P51587 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCA2P51587 RPL34P20-201ENST00000442771 351 ntBASIC6.06□□□□□ -1.44
BRCA2P51587 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
BRCA2P51587 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.06□□□□□ -1.44
BRCA2P51587 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BRCA2P51587 ELOCP19-201ENST00000411919 318 ntBASIC6.06□□□□□ -1.44
BRCA2P51587 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCA2P51587 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.06□□□□□ -1.44
BRCA2P51587 RPS4XP20-201ENST00000505751 772 ntBASIC6.06□□□□□ -1.44
BRCA2P51587 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.06□□□□□ -1.44
BRCA2P51587 MIR4675-201ENST00000577898 77 ntBASIC6.06□□□□□ -1.44
BRCA2P51587 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.06□□□□□ -1.44
BRCA2P51587 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.06□□□□□ -1.44
BRCA2P51587 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
BRCA2P51587 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BRCA2P51587 AC007938.2-201ENST00000604666 2634 ntBASIC6.06□□□□□ -1.44
BRCA2P51587 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.06□□□□□ -1.44
BRCA2P51587 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
BRCA2P51587 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.06□□□□□ -1.44
BRCA2P51587 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCA2P51587 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCA2P51587 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.06□□□□□ -1.44
BRCA2P51587 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.06□□□□□ -1.44
BRCA2P51587 AC024589.2-201ENST00000605642 1294 ntBASIC6.06□□□□□ -1.44
BRCA2P51587 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
BRCA2P51587 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCA2P51587 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 SNORA37-201ENST00000384504 129 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCA2P51587 CDC27P1-201ENST00000445384 715 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCA2P51587 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.05□□□□□ -1.44
BRCA2P51587 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCA2P51587 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCA2P51587 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCA2P51587 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 AC104118.1-201ENST00000607625 1589 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCA2P51587 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCA2P51587 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 RN7SKP149-201ENST00000363008 344 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCA2P51587 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCA2P51587 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.05□□□□□ -1.44
BRCA2P51587 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BRCA2P51587 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCA2P51587 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.05□□□□□ -1.44
BRCA2P51587 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCA2P51587 AL445423.1-201ENST00000609941 536 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 AL359757.1-201ENST00000623176 255 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCA2P51587 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCA2P51587 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCA2P51587 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCA2P51587 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCA2P51587 AC105384.2-201ENST00000508433 640 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 MIR4737-201ENST00000583979 81 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 AC009597.2-201ENST00000604659 592 ntBASIC6.05□□□□□ -1.44
BRCA2P51587 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCA2P51587 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.04□□□□□ -1.44
BRCA2P51587 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.04□□□□□ -1.44
BRCA2P51587 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.04□□□□□ -1.44
BRCA2P51587 AL109766.1-201ENST00000555080 552 ntBASIC6.04□□□□□ -1.44
BRCA2P51587 HIRAP1-201ENST00000605318 787 ntBASIC6.04□□□□□ -1.44
BRCA2P51587 AC003973.3-201ENST00000624863 2822 ntBASIC6.04□□□□□ -1.44
BRCA2P51587 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
BRCA2P51587 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms