Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.25□□□□□ -1.41
LHX1P48742 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.25□□□□□ -1.41
LHX1P48742 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.25□□□□□ -1.41
LHX1P48742 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 AP001496.3-201ENST00000580230 913 ntBASIC6.25□□□□□ -1.41
LHX1P48742 MIR4260-201ENST00000583107 67 ntBASIC6.25□□□□□ -1.41
LHX1P48742 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 RPL12P48-201ENST00000605620 304 ntBASIC6.25□□□□□ -1.41
LHX1P48742 AC022960.2-201ENST00000616300 666 ntBASIC6.25□□□□□ -1.41
LHX1P48742 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
LHX1P48742 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.25□□□□□ -1.41
LHX1P48742 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 MIPEPP2-201ENST00000422560 1819 ntBASIC6.25□□□□□ -1.41
LHX1P48742 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX1P48742 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 CCAT2-201ENST00000630920 1752 ntBASIC6.24□□□□□ -1.41
LHX1P48742 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 SNORD1C-201ENST00000363315 78 ntBASIC6.24□□□□□ -1.41
LHX1P48742 RNA5SP435-201ENST00000364044 108 ntBASIC6.24□□□□□ -1.41
LHX1P48742 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
LHX1P48742 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 RNA5SP122-201ENST00000384457 108 ntBASIC6.24□□□□□ -1.41
LHX1P48742 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 CDY17P-201ENST00000414121 1282 ntBASIC6.24□□□□□ -1.41
LHX1P48742 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 AC104843.2-201ENST00000427666 297 ntBASIC6.24□□□□□ -1.41
LHX1P48742 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.24□□□□□ -1.41
LHX1P48742 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 RNU1-88P-201ENST00000459274 128 ntBASIC6.24□□□□□ -1.41
LHX1P48742 RPS17P15-201ENST00000475609 349 ntBASIC6.24□□□□□ -1.41
LHX1P48742 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 PPIAP19-201ENST00000486414 492 ntBASIC6.24□□□□□ -1.41
LHX1P48742 NENFP3-201ENST00000503735 313 ntBASIC6.24□□□□□ -1.41
LHX1P48742 MIR2117-201ENST00000516780 80 ntBASIC6.24□□□□□ -1.41
LHX1P48742 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.24□□□□□ -1.41
LHX1P48742 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LHX1P48742 AC244502.2-201ENST00000543361 851 ntBASIC6.24□□□□□ -1.41
LHX1P48742 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX1P48742 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX1P48742 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LHX1P48742 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX1P48742 AC127024.6-201ENST00000621598 424 ntBASIC6.24□□□□□ -1.41
LHX1P48742 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.24□□□□□ -1.41
LHX1P48742 OR11H2-202ENST00000641517 1085 ntBASIC6.24□□□□□ -1.41
LHX1P48742 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX1P48742 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX1P48742 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX1P48742 AL662795.2-201ENST00000624252 3706 ntBASIC6.24□□□□□ -1.41
LHX1P48742 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX1P48742 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX1P48742 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.24□□□□□ -1.41
LHX1P48742 AL161901.1-201ENST00000624954 3425 ntBASIC6.24□□□□□ -1.41
LHX1P48742 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.23□□□□□ -1.41
LHX1P48742 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
LHX1P48742 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
LHX1P48742 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 RN7SKP292-201ENST00000365522 317 ntBASIC6.23□□□□□ -1.41
LHX1P48742 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LHX1P48742 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.23□□□□□ -1.41
LHX1P48742 MRPL53P1-201ENST00000414323 319 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms