Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC026782.2-201ENST00000510845 636 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.11□□□□□ -1.43
SLC1A1P43005 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC1A1P43005 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC1A1P43005 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC1A1P43005 AC005618.4-201ENST00000625053 554 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC1A1P43005 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SLC1A1P43005 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC1A1P43005 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 AL034546.1-201ENST00000623740 3693 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 AC114774.1-201ENST00000507410 1770 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 AP004607.3-201ENST00000530354 3915 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
SLC1A1P43005 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
SLC1A1P43005 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC1A1P43005 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
SLC1A1P43005 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SLC1A1P43005 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 RNA5SP453-201ENST00000362503 119 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC1A1P43005 AL096711.1-201ENST00000404780 554 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AL359885.1-201ENST00000415786 903 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC117434.1-201ENST00000419971 836 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC019205.1-201ENST00000421830 730 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 DEFA9P-201ENST00000433042 285 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 RPL6P30-201ENST00000443382 862 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC1A1P43005 CFL1P4-201ENST00000451536 498 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 MEMO1P4-201ENST00000453590 386 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 AC098818.1-201ENST00000478593 252 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC1A1P43005 AL158068.1-201ENST00000506116 616 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC1A1P43005 AC009879.1-201ENST00000520029 839 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC1A1P43005 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.1□□□□□ -1.43
SLC1A1P43005 RPA2P1-201ENST00000556557 721 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC090236.2-201ENST00000587933 1101 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC005479.3-201ENST00000602790 431 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AC004801.6-201ENST00000616571 978 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 MIR6721-201ENST00000617181 87 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 AL136228.1-201ENST00000622221 319 ntBASIC6.1□□□□□ -1.43
SLC1A1P43005 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC1A1P43005 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC1A1P43005 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC1A1P43005 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC1A1P43005 PSG10P-201ENST00000501199 1500 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC1A1P43005 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC1A1P43005 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC1A1P43005 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SLC1A1P43005 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC1A1P43005 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SLC1A1P43005 AL049634.1-201ENST00000453770 1720 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 SNORA51.9-201ENST00000384295 124 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SLC1A1P43005 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC1A1P43005 AL158827.1-201ENST00000416300 391 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC1A1P43005 AL139158.1-201ENST00000424719 340 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 EIF5AP4-201ENST00000441206 465 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 RBMY2AP-201ENST00000445405 1157 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 RBMY2CP-201ENST00000448575 1157 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 RBMY2DP-202ENST00000448881 1157 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 RBMY2BP-202ENST00000451071 1156 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC1A1P43005 AC111000.6-201ENST00000514471 709 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC1A1P43005 AP003033.2-201ENST00000528901 805 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SLC1A1P43005 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC1A1P43005 BTG1P1-201ENST00000540396 508 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC1A1P43005 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.09□□□□□ -1.43
SLC1A1P43005 HMGN2P47-201ENST00000559378 272 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.09□□□□□ -1.43
SLC1A1P43005 LSM1P2-201ENST00000604911 322 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 MIR6809-201ENST00000612189 116 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 HTR1DP1-201ENST00000616500 888 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 AC245014.3-201ENST00000618589 347 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.09□□□□□ -1.43
SLC1A1P43005 OR11H2-202ENST00000641517 1085 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.09□□□□□ -1.43
SLC1A1P43005 PARP4P2-201ENST00000446672 3326 ntBASIC6.09□□□□□ -1.43
SLC1A1P43005 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms