Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.98□□□□□ -1.45
FDFT1P37268 FAM183DP-201ENST00000421987 399 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.98□□□□□ -1.45
FDFT1P37268 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.98□□□□□ -1.45
FDFT1P37268 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.98□□□□□ -1.45
FDFT1P37268 AC073476.1-201ENST00000452854 407 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 RPL12P39-201ENST00000455456 496 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 AC091874.2-201ENST00000505889 720 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.98□□□□□ -1.45
FDFT1P37268 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.98□□□□□ -1.45
FDFT1P37268 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.98□□□□□ -1.45
FDFT1P37268 AP005119.1-201ENST00000580956 292 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.98□□□□□ -1.45
FDFT1P37268 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
FDFT1P37268 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FDFT1P37268 AC096708.4-201ENST00000620563 552 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
FDFT1P37268 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FDFT1P37268 QRSL1P1-201ENST00000400977 1540 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.98□□□□□ -1.45
FDFT1P37268 NCOA4P2-201ENST00000340589 1813 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
FDFT1P37268 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
FDFT1P37268 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.97□□□□□ -1.45
FDFT1P37268 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.97□□□□□ -1.45
FDFT1P37268 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 RNA5SP453-201ENST00000362503 119 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 RN7SKP78-201ENST00000364711 318 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.97□□□□□ -1.45
FDFT1P37268 AC016739.1-201ENST00000405359 345 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 RN7SKP86-201ENST00000410454 332 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.97□□□□□ -1.45
FDFT1P37268 AL354766.1-201ENST00000423396 542 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 VN1R21P-201ENST00000426703 765 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.97□□□□□ -1.45
FDFT1P37268 AC015983.1-201ENST00000441577 373 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC023141.8-201ENST00000442554 208 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.97□□□□□ -1.45
FDFT1P37268 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 GEMIN2P1-201ENST00000454246 752 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC044810.1-201ENST00000480271 711 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.97□□□□□ -1.45
FDFT1P37268 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.97□□□□□ -1.45
FDFT1P37268 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.97□□□□□ -1.45
FDFT1P37268 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.97□□□□□ -1.45
FDFT1P37268 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.97□□□□□ -1.45
FDFT1P37268 AP000619.2-201ENST00000546014 969 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.97□□□□□ -1.45
FDFT1P37268 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.97□□□□□ -1.45
FDFT1P37268 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.97□□□□□ -1.45
FDFT1P37268 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 ZNF322P1-201ENST00000568013 1209 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 ARGFXP2-201ENST00000579304 949 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.97□□□□□ -1.45
FDFT1P37268 NANOGP3-201ENST00000605855 286 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC005828.7-201ENST00000607331 556 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AL136131.3-201ENST00000607600 188 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC004801.6-201ENST00000616571 978 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 MIR6813-201ENST00000621638 56 ntBASIC5.97□□□□□ -1.45
FDFT1P37268 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.97□□□□□ -1.45
FDFT1P37268 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.97□□□□□ -1.45
FDFT1P37268 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.97□□□□□ -1.45
FDFT1P37268 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
FDFT1P37268 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
FDFT1P37268 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
FDFT1P37268 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
FDFT1P37268 PPBPP2-201ENST00000513150 1362 ntBASIC5.96□□□□□ -1.45
FDFT1P37268 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.96□□□□□ -1.45
FDFT1P37268 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
FDFT1P37268 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 SNORA51.9-201ENST00000384295 124 ntBASIC5.96□□□□□ -1.46
FDFT1P37268 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 GCNT1P4-201ENST00000404096 329 ntBASIC5.96□□□□□ -1.46
FDFT1P37268 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.96□□□□□ -1.46
FDFT1P37268 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.96□□□□□ -1.46
FDFT1P37268 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.96□□□□□ -1.46
FDFT1P37268 GAPDHP75-201ENST00000433910 943 ntBASIC5.96□□□□□ -1.46
FDFT1P37268 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.96□□□□□ -1.46
FDFT1P37268 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FDFT1P37268 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.96□□□□□ -1.46
FDFT1P37268 TUBB4BP6-201ENST00000437576 479 ntBASIC5.96□□□□□ -1.46
FDFT1P37268 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.96□□□□□ -1.46
FDFT1P37268 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.96□□□□□ -1.46
FDFT1P37268 RPL6P30-201ENST00000443382 862 ntBASIC5.96□□□□□ -1.46
FDFT1P37268 AC005077.1-201ENST00000449226 375 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms