Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGA1P17096 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGA1P17096 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HMGA1P17096 AC005725.1-201ENST00000577346 2607 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 AL033543.1-201ENST00000623440 13454 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 AL161756.3-201ENST00000641216 2071 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 RNA5SP30-201ENST00000365552 115 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HMGA1P17096 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGA1P17096 BMS1P13-201ENST00000417301 885 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGA1P17096 AL450996.1-201ENST00000445574 1202 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGA1P17096 RNU1-88P-201ENST00000459274 128 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 RN7SL629P-201ENST00000489622 285 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 AC108693.1-201ENST00000496068 432 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGA1P17096 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGA1P17096 AC105384.2-201ENST00000508433 640 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HMGA1P17096 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGA1P17096 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGA1P17096 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGA1P17096 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGA1P17096 AC079395.2-201ENST00000610982 737 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 AC007204.2-201ENST00000615022 616 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 AL390318.1-201ENST00000624564 687 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 AL049634.1-201ENST00000453770 1720 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGA1P17096 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGA1P17096 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGA1P17096 AC104162.1-201ENST00000430831 2382 ntBASIC5.99□□□□□ -1.45
HMGA1P17096 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HMGA1P17096 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGA1P17096 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HMGA1P17096 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 Z83820.1-201ENST00000456978 1499 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HMGA1P17096 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGA1P17096 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGA1P17096 MIR1178-201ENST00000408396 91 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGA1P17096 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGA1P17096 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGA1P17096 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.98□□□□□ -1.45
HMGA1P17096 OR7E116P-201ENST00000448529 957 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 AL450023.1-201ENST00000450868 751 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 OSTCP1-201ENST00000455507 450 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 LDHBP2-201ENST00000456969 1005 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 AC110749.1-201ENST00000462007 357 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 SLC25A51P1-201ENST00000468432 871 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGA1P17096 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGA1P17096 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGA1P17096 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGA1P17096 AL121594.2-201ENST00000541658 472 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGA1P17096 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGA1P17096 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGA1P17096 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGA1P17096 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGA1P17096 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGA1P17096 AL359513.1-201ENST00000614364 557 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.98□□□□□ -1.45
HMGA1P17096 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGA1P17096 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
HMGA1P17096 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HMGA1P17096 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGA1P17096 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
HMGA1P17096 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGA1P17096 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
HMGA1P17096 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms