Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 AC126773.4-201ENST00000612545 3043 ntBASIC7.07□□□□□ -1.28
NID1P14543 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 OR9K2-201ENST00000305377 1122 ntBASIC7.07□□□□□ -1.28
NID1P14543 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
NID1P14543 RNA5SP389-201ENST00000362610 115 ntBASIC7.07□□□□□ -1.28
NID1P14543 RNA5SP226-201ENST00000362653 115 ntBASIC7.07□□□□□ -1.28
NID1P14543 RNA5SP149-201ENST00000364952 92 ntBASIC7.07□□□□□ -1.28
NID1P14543 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 Y_RNA.402-201ENST00000383972 102 ntBASIC7.07□□□□□ -1.28
NID1P14543 Y_RNA.529-201ENST00000384586 119 ntBASIC7.07□□□□□ -1.28
NID1P14543 AC093719.1-202ENST00000392735 373 ntBASIC7.07□□□□□ -1.28
NID1P14543 OR4F7P-201ENST00000402444 931 ntBASIC7.07□□□□□ -1.28
NID1P14543 OR4F1P-201ENST00000405102 938 ntBASIC7.07□□□□□ -1.28
NID1P14543 MIR1231-201ENST00000408101 92 ntBASIC7.07□□□□□ -1.28
NID1P14543 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 OR4F2P-201ENST00000424047 938 ntBASIC7.07□□□□□ -1.28
NID1P14543 ELOCP14-201ENST00000428070 331 ntBASIC7.07□□□□□ -1.28
NID1P14543 RPS21P1-201ENST00000434479 247 ntBASIC7.07□□□□□ -1.28
NID1P14543 ARMC4P1-201ENST00000438905 707 ntBASIC7.07□□□□□ -1.28
NID1P14543 ELOCP7-201ENST00000439968 331 ntBASIC7.07□□□□□ -1.28
NID1P14543 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 AL591363.1-201ENST00000450091 483 ntBASIC7.07□□□□□ -1.28
NID1P14543 MTCO3P11-201ENST00000455103 774 ntBASIC7.07□□□□□ -1.28
NID1P14543 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 AC087385.2-201ENST00000477729 498 ntBASIC7.07□□□□□ -1.28
NID1P14543 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
NID1P14543 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 SCARNA20.1-201ENST00000516009 138 ntBASIC7.07□□□□□ -1.28
NID1P14543 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.07□□□□□ -1.28
NID1P14543 OR5AQ1P-201ENST00000527596 927 ntBASIC7.07□□□□□ -1.28
NID1P14543 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.07□□□□□ -1.28
NID1P14543 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.07□□□□□ -1.28
NID1P14543 NPM1P5-201ENST00000557228 838 ntBASIC7.07□□□□□ -1.28
NID1P14543 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 MIR744-201ENST00000578242 98 ntBASIC7.07□□□□□ -1.28
NID1P14543 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.07□□□□□ -1.28
NID1P14543 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
NID1P14543 AL009028.1-201ENST00000604895 802 ntBASIC7.07□□□□□ -1.28
NID1P14543 AC005021.1-201ENST00000608730 355 ntBASIC7.07□□□□□ -1.28
NID1P14543 AC099676.1-201ENST00000608886 657 ntBASIC7.07□□□□□ -1.28
NID1P14543 AC019193.2-201ENST00000610012 634 ntBASIC7.07□□□□□ -1.28
NID1P14543 AL020991.1-201ENST00000612314 373 ntBASIC7.07□□□□□ -1.28
NID1P14543 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NID1P14543 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 AC018816.2-201ENST00000621460 353 ntBASIC7.07□□□□□ -1.28
NID1P14543 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NID1P14543 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
NID1P14543 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NID1P14543 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 Z99129.4-201ENST00000624649 2435 ntBASIC7.07□□□□□ -1.28
NID1P14543 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
NID1P14543 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.07□□□□□ -1.28
NID1P14543 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.07□□□□□ -1.28
NID1P14543 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NID1P14543 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NID1P14543 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NID1P14543 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.06□□□□□ -1.28
NID1P14543 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NID1P14543 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms