Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1BO75841 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1BO75841 RNA5SP346-201ENST00000363541 121 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
UPK1BO75841 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.94□□□□□ -1.62
UPK1BO75841 RNU1-56P-201ENST00000391303 164 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 RNA5SP487-201ENST00000410186 122 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 RN7SKP30-201ENST00000411373 334 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.94□□□□□ -1.62
UPK1BO75841 RNF10P1-201ENST00000418589 369 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC091492.1-201ENST00000419844 272 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC012519.1-201ENST00000424588 610 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AHCYP8-201ENST00000425108 209 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 PUDPP2-201ENST00000431423 643 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AL389925.1-201ENST00000432257 728 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 RPL19P16-201ENST00000433839 588 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AP006193.1-201ENST00000440724 485 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AL121578.2-201ENST00000448797 447 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1BO75841 AP000797.2-201ENST00000475768 606 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 ATP5LP5-201ENST00000483050 299 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 RPL21P42-201ENST00000488408 464 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 RN7SL591P-201ENST00000496150 292 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 KHDC1P1-201ENST00000511053 508 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC091912.1-201ENST00000511351 248 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.94□□□□□ -1.62
UPK1BO75841 AC093816.1-201ENST00000515076 913 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1BO75841 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1BO75841 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.94□□□□□ -1.62
UPK1BO75841 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1BO75841 HIGD1AP9-201ENST00000550710 279 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1BO75841 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
UPK1BO75841 AC107993.1-201ENST00000591343 684 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC009237.13-201ENST00000603193 276 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1BO75841 pRNA.9-201ENST00000618609 89 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC241377.1-201ENST00000619797 406 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC022106.2-201ENST00000620114 757 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1BO75841 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.94□□□□□ -1.62
UPK1BO75841 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.94□□□□□ -1.62
UPK1BO75841 AC073869.10-201ENST00000642016 354 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1BO75841 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.94□□□□□ -1.62
UPK1BO75841 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.94□□□□□ -1.62
UPK1BO75841 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UPK1BO75841 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
UPK1BO75841 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.94□□□□□ -1.62
UPK1BO75841 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UPK1BO75841 TET1P1-201ENST00000426627 2301 ntBASIC4.94□□□□□ -1.62
UPK1BO75841 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UPK1BO75841 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1BO75841 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
UPK1BO75841 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
UPK1BO75841 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1BO75841 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1BO75841 AL078599.1-201ENST00000402075 293 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1BO75841 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1BO75841 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC112492.2-201ENST00000432774 1030 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 EMC3-AS1-205ENST00000438698 534 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 HIGD1AP16-201ENST00000450986 258 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC021242.1-201ENST00000507315 2035 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 IMPA1P1-201ENST00000510718 842 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1BO75841 RNA5SP418-201ENST00000515951 117 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 RNA5SP434-201ENST00000516647 121 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.93□□□□□ -1.62
UPK1BO75841 IGKV2OR22-4-201ENST00000523309 367 ntBASIC4.93□□□□□ -1.62
UPK1BO75841 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1BO75841 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1BO75841 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1BO75841 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1BO75841 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
UPK1BO75841 AC015871.5-202ENST00000623252 701 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms