Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 AL161912.4-201ENST00000623889 2468 ntBASIC5.62□□□□□ -1.51
HCN1O60741 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HCN1O60741 MIR133A2-201ENST00000347538 102 ntBASIC5.62□□□□□ -1.51
HCN1O60741 SNORA21-201ENST00000362423 132 ntBASIC5.62□□□□□ -1.51
HCN1O60741 SNORD1C-201ENST00000363315 78 ntBASIC5.62□□□□□ -1.51
HCN1O60741 SNORA43.1-201ENST00000364863 140 ntBASIC5.62□□□□□ -1.51
HCN1O60741 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.62□□□□□ -1.51
HCN1O60741 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 AC073594.1-201ENST00000462065 364 ntBASIC5.62□□□□□ -1.51
HCN1O60741 AC098847.1-201ENST00000473094 348 ntBASIC5.62□□□□□ -1.51
HCN1O60741 AC012123.2-201ENST00000485809 248 ntBASIC5.62□□□□□ -1.51
HCN1O60741 AC008945.1-201ENST00000505144 499 ntBASIC5.62□□□□□ -1.51
HCN1O60741 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.62□□□□□ -1.51
HCN1O60741 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.62□□□□□ -1.51
HCN1O60741 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.62□□□□□ -1.51
HCN1O60741 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.62□□□□□ -1.51
HCN1O60741 SETP21-201ENST00000514799 892 ntBASIC5.62□□□□□ -1.51
HCN1O60741 IGKV3D-25-201ENST00000519599 235 ntBASIC5.62□□□□□ -1.51
HCN1O60741 AP003396.4-201ENST00000527574 265 ntBASIC5.62□□□□□ -1.51
HCN1O60741 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.62□□□□□ -1.51
HCN1O60741 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HCN1O60741 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.62□□□□□ -1.51
HCN1O60741 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.62□□□□□ -1.51
HCN1O60741 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.62□□□□□ -1.51
HCN1O60741 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.62□□□□□ -1.51
HCN1O60741 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.62□□□□□ -1.51
HCN1O60741 AC067773.1-201ENST00000603284 1094 ntBASIC5.62□□□□□ -1.51
HCN1O60741 AL139041.1-201ENST00000605480 610 ntBASIC5.62□□□□□ -1.51
HCN1O60741 AC024884.1-201ENST00000620583 399 ntBASIC5.62□□□□□ -1.51
HCN1O60741 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 AL121839.2-201ENST00000565058 6943 ntBASIC5.62□□□□□ -1.51
HCN1O60741 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 MTCO1P28-201ENST00000574177 1528 ntBASIC5.62□□□□□ -1.51
HCN1O60741 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 CASC19-238ENST00000641523 1558 ntBASIC5.62□□□□□ -1.51
HCN1O60741 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 GTF2IP4-201ENST00000453092 2054 ntBASIC5.62□□□□□ -1.51
HCN1O60741 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.62□□□□□ -1.51
HCN1O60741 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN1O60741 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HCN1O60741 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HCN1O60741 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN1O60741 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN1O60741 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN1O60741 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.61□□□□□ -1.51
HCN1O60741 RNA5SP156-201ENST00000410250 110 ntBASIC5.61□□□□□ -1.51
HCN1O60741 RANP7-201ENST00000418085 644 ntBASIC5.61□□□□□ -1.51
HCN1O60741 RPS7P8-201ENST00000418311 581 ntBASIC5.61□□□□□ -1.51
HCN1O60741 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.61□□□□□ -1.51
HCN1O60741 AL365220.1-201ENST00000432923 399 ntBASIC5.61□□□□□ -1.51
HCN1O60741 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 AC013410.1-201ENST00000436223 1232 ntBASIC5.61□□□□□ -1.51
HCN1O60741 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.61□□□□□ -1.51
HCN1O60741 AL161722.1-201ENST00000446972 1032 ntBASIC5.61□□□□□ -1.51
HCN1O60741 CFL1P4-201ENST00000451536 498 ntBASIC5.61□□□□□ -1.51
HCN1O60741 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.61□□□□□ -1.51
HCN1O60741 RN7SL352P-201ENST00000466002 277 ntBASIC5.61□□□□□ -1.51
HCN1O60741 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.61□□□□□ -1.51
HCN1O60741 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.61□□□□□ -1.51
HCN1O60741 RN7SL284P-201ENST00000498823 275 ntBASIC5.61□□□□□ -1.51
HCN1O60741 LDHAP1-201ENST00000509421 992 ntBASIC5.61□□□□□ -1.51
HCN1O60741 NPM1P21-201ENST00000513394 762 ntBASIC5.61□□□□□ -1.51
HCN1O60741 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.61□□□□□ -1.51
HCN1O60741 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.61□□□□□ -1.51
HCN1O60741 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.61□□□□□ -1.51
HCN1O60741 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.61□□□□□ -1.51
HCN1O60741 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HCN1O60741 AC090826.1-203ENST00000569235 490 ntBASIC5.61□□□□□ -1.51
HCN1O60741 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.61□□□□□ -1.51
HCN1O60741 MIR132-201ENST00000591554 101 ntBASIC5.61□□□□□ -1.51
HCN1O60741 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 AC108865.2-201ENST00000606881 432 ntBASIC5.61□□□□□ -1.51
HCN1O60741 AC004801.6-201ENST00000616571 978 ntBASIC5.61□□□□□ -1.51
HCN1O60741 AC245014.3-201ENST00000618589 347 ntBASIC5.61□□□□□ -1.51
HCN1O60741 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 AL512652.1-201ENST00000619006 500 ntBASIC5.61□□□□□ -1.51
HCN1O60741 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN1O60741 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HCN1O60741 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HCN1O60741 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN1O60741 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms