Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
FOXN3O00409 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
FOXN3O00409 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXN3O00409 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
FOXN3O00409 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
FOXN3O00409 PSMA6P1-201ENST00000400275 741 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 RPL7AP51-201ENST00000422016 760 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AL121882.1-201ENST00000422893 417 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXN3O00409 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXN3O00409 AC013403.1-201ENST00000436954 263 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 AL158053.1-201ENST00000441503 453 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AL512593.1-201ENST00000444758 779 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXN3O00409 CEACAMP11-201ENST00000455211 583 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AL445687.2-201ENST00000458156 728 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.59□□□□□ -1.35
FOXN3O00409 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.59□□□□□ -1.35
FOXN3O00409 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.59□□□□□ -1.35
FOXN3O00409 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 GUSBP9-201ENST00000510138 584 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AC027338.1-201ENST00000514840 825 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 RN7SKP248-201ENST00000516278 305 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AC116917.1-201ENST00000520558 305 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AC008429.4-201ENST00000521201 182 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXN3O00409 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXN3O00409 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.59□□□□□ -1.35
FOXN3O00409 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXN3O00409 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 AC027176.2-201ENST00000559166 746 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AC004890.3-201ENST00000605566 1095 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 RPSAP75-201ENST00000605848 301 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AC067838.1-201ENST00000606064 577 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AC024933.1-201ENST00000608472 348 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 AP000240.1-201ENST00000609910 452 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 CR589904.2-201ENST00000612533 440 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXN3O00409 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXN3O00409 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 CASC19-238ENST00000641523 1558 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
FOXN3O00409 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 AKAP17BP-201ENST00000431706 2719 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXN3O00409 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXN3O00409 AC024651.2-201ENST00000562480 2098 ntBASIC6.59□□□□□ -1.35
FOXN3O00409 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
FOXN3O00409 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
FOXN3O00409 AC073365.1-203ENST00000641055 1992 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
FOXN3O00409 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXN3O00409 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 AC010401.2-201ENST00000575137 4934 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 RNA5SP375-201ENST00000362975 119 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 SNORD51.1-201ENST00000365405 77 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 AL139805.1-201ENST00000407837 289 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 RNA5SP198-201ENST00000410376 127 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 MTND4LP17-201ENST00000414607 293 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXN3O00409 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXN3O00409 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 SEC63P1-201ENST00000425785 1258 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXN3O00409 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 AL590004.3-202ENST00000445883 451 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms