Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC012078.1-201ENST00000405035 1646 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL035405.1-201ENST00000400795 710 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 ST13P16-201ENST00000401760 781 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 SEPT7P8-201ENST00000413308 775 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CDY17P-201ENST00000414121 1282 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CHEK2P5-201ENST00000423877 246 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CDY8P-201ENST00000428380 1279 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 ZNF965P-201ENST00000432501 817 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL353662.1-201ENST00000439099 327 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CDY20P-201ENST00000447528 1279 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CABYRP1-201ENST00000465493 1045 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC093663.2-201ENST00000484625 313 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 RN7SL561P-201ENST00000488553 281 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC063943.2-201ENST00000495697 534 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 RN7SKP238-201ENST00000516483 249 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 RNA5SP340-201ENST00000517132 107 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC245014.3-201ENST00000618589 347 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL512652.1-201ENST00000619006 500 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 OR1N1-202ENST00000619659 939 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL138955.1-201ENST00000622881 1040 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL359195.2-201ENST00000623657 4412 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AL359976.1-201ENST00000418655 3528 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC018717.1-201ENST00000457712 1505 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 CYP2G2P-201ENST00000594920 1485 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 MTHFD2P5-201ENST00000320415 844 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 FUNDC2P3-201ENST00000334716 533 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 RNU1-24P-201ENST00000364285 165 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 SNORA72.3-201ENST00000365074 132 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 RNA5SP284-201ENST00000384547 118 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 RN7SKP229-201ENST00000410465 302 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 RNU4-64P-201ENST00000410795 131 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 MRPS21P3-201ENST00000436696 262 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AC023141.3-201ENST00000436698 278 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AL117351.1-201ENST00000438864 766 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 HIGD1AP16-201ENST00000450986 258 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 CFL1P4-201ENST00000451536 498 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AC007998.1-201ENST00000474156 672 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 RPL23AP73-201ENST00000492507 471 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 OR5H7P-201ENST00000514084 930 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 SNORD46.2-201ENST00000516021 102 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 RNU6-415P-201ENST00000516252 97 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AC022826.1-201ENST00000519383 805 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AC068339.2-201ENST00000534395 618 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 MTATP6P2-201ENST00000603319 678 ntBASIC6.03□□□□□ -1.44
CCDC187A0A096LP49 AC026979.4-201ENST00000606555 645 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms