Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 GNL2P1-201ENST00000451274 2190 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 RN7SKP275-201ENST00000364626 301 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 RNU1-59P-201ENST00000364829 162 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AL096711.1-201ENST00000404780 554 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AL096800.1-201ENST00000405326 893 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 MIR1282-201ENST00000408865 101 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 HMGN1P2-201ENST00000445197 310 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AL445466.1-201ENST00000448432 357 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AL359839.1-201ENST00000451975 1160 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC104164.1-201ENST00000460282 590 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC098847.1-201ENST00000473094 348 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 OR2A3P-201ENST00000493774 953 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 RN7SKP238-201ENST00000516483 249 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AL049779.3-201ENST00000557141 606 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 CYCSP38-201ENST00000559840 322 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC008507.3-201ENST00000585753 472 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 U1.25-201ENST00000614085 162 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 U1.34-201ENST00000618578 162 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 U1.31-201ENST00000620022 160 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC096708.4-201ENST00000620563 552 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AP002512.4-202ENST00000641599 4530 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 CASC19-255ENST00000641733 1385 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 RBPJP7-201ENST00000442803 1447 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 RBPJP5-201ENST00000449433 1447 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 THAP12P9-201ENST00000503971 2360 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 QRSL1P1-201ENST00000400977 1540 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 LYARP1-201ENST00000436977 1501 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 AC004386.1-201ENST00000393214 761 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 RPL35AP3-201ENST00000414680 288 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 RPS10P18-201ENST00000442662 495 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 PPIAP27-201ENST00000453800 265 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 RN7SL269P-201ENST00000467795 305 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 LSM3P4-201ENST00000502948 309 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 LDHAP1-201ENST00000509421 992 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 RN7SKP288-201ENST00000516227 268 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 NDUFA5P11-201ENST00000567995 343 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 AL136228.1-201ENST00000622221 319 ntBASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4BQ9Y4P1 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
ATG4BQ9Y4P1 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms