Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 AC069499.2-201ENST00000610665 382 ntBASIC10.25□□□□□ -0.77
PHF8Q9UPP1 AL359535.1-201ENST00000612100 1087 ntBASIC10.25□□□□□ -0.77
PHF8Q9UPP1 AL359880.1-201ENST00000621879 266 ntBASIC10.25□□□□□ -0.77
PHF8Q9UPP1 AC073348.1-201ENST00000623002 331 ntBASIC10.25□□□□□ -0.77
PHF8Q9UPP1 MIR6863-201ENST00000636112 90 ntBASIC10.25□□□□□ -0.77
PHF8Q9UPP1 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 GUCY2GP-201ENST00000479705 3222 ntBASIC10.25□□□□□ -0.77
PHF8Q9UPP1 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 AC138409.1-201ENST00000505001 3598 ntBASIC10.25□□□□□ -0.77
PHF8Q9UPP1 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PHF8Q9UPP1 HSPD1P1-201ENST00000503199 1726 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC092646.2-201ENST00000431242 2095 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 RNA5SP114-201ENST00000363780 113 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 RNU12-2P-201ENST00000364789 156 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 MIR498-201ENST00000385134 124 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 HMGB3P23-201ENST00000414981 585 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AL512649.1-201ENST00000428997 581 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 RPL7P31-201ENST00000450192 724 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 RN7SL849P-201ENST00000485236 295 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 RPS4XP15-201ENST00000489210 795 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 RN7SL518P-201ENST00000491887 280 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 NACAP6-201ENST00000509572 622 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AL157687.1-201ENST00000554853 619 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 MIR548AB-201ENST00000584917 84 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AL031777.2-201ENST00000611953 196 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC040896.1-201ENST00000613819 479 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 HOTTIP_2.1-201ENST00000616633 376 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 ABBA01000935.2-201ENST00000637477 838 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AL356585.10-201ENST00000641883 123 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC073055.1-201ENST00000456901 1621 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 AC017007.4-201ENST00000503353 1352 ntBASIC10.24□□□□□ -0.77
PHF8Q9UPP1 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PHF8Q9UPP1 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 AL445933.1-201ENST00000434240 2242 ntBASIC10.23□□□□□ -0.77
PHF8Q9UPP1 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 MTCO1P23-201ENST00000415223 1526 ntBASIC10.23□□□□□ -0.77
PHF8Q9UPP1 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PHF8Q9UPP1 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms