Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
SHROOM4Q9ULL8 AL391262.1-201ENST00000556558 1992 ntBASIC11.21□□□□□ -0.62
SHROOM4Q9ULL8 AL662795.2-201ENST00000624252 3706 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AL109941.1-201ENST00000401925 229 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 RPL36P18-201ENST00000419316 318 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC100832.1-201ENST00000471945 383 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 OR2AO1P-201ENST00000476497 403 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 RPL7AP6-201ENST00000477943 801 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC068522.1-201ENST00000482895 345 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC104785.1-201ENST00000603220 588 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AL121612.2-201ENST00000612261 482 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 MIR6837-201ENST00000620884 64 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 DPY19L1P1-201ENST00000417811 2594 ntBASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SHROOM4Q9ULL8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 PTCD2P2-201ENST00000415579 1095 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 OR7E116P-201ENST00000448529 957 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AC111000.5-201ENST00000506559 1178 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AC119403.2-201ENST00000590960 598 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 FAM27E4-201ENST00000605259 342 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AP001784.1-201ENST00000624107 428 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 PABPC1P8-201ENST00000452851 2086 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AC123912.3-201ENST00000600907 1367 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 MTCO1P46-201ENST00000451639 1491 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 OR2W4P-201ENST00000406496 926 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 SNORA11-201ENST00000408789 128 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AL807761.1-201ENST00000417622 171 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 CUBNP2-201ENST00000443534 1139 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AL606490.1-201ENST00000452266 765 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AL022319.1-201ENST00000458183 1167 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 CDC42P3-201ENST00000518493 633 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 HNRNPCP1-201ENST00000556181 766 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 AC010809.3-201ENST00000621310 641 ntBASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 CASC22-202ENST00000628396 802 ntTSL 5 BASIC11.19□□□□□ -0.62
SHROOM4Q9ULL8 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 AL031651.1-201ENST00000615357 1438 ntBASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 CASC19-248ENST00000641674 1356 ntBASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 RNA5SP333-201ENST00000363466 118 ntBASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 RNA5SP334-201ENST00000364825 118 ntBASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 RN7SKP213-201ENST00000410746 298 ntBASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 RN7SKP29-201ENST00000410957 272 ntBASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 AL390119.1-201ENST00000440329 312 ntBASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 AP002884.5-201ENST00000595053 1132 ntBASIC11.18□□□□□ -0.62
SHROOM4Q9ULL8 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms