Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 PPBPP2-201ENST00000513150 1362 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC004656.1-201ENST00000568479 4951 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC117409.1-201ENST00000470499 1310 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 MFSD8-219ENST00000641228 2559 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 RN7SKP171-201ENST00000364417 303 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC019205.1-201ENST00000421830 730 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AL354893.1-201ENST00000433735 348 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 ATP5LP2-201ENST00000440646 311 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC023194.2-201ENST00000465398 406 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AL157777.1-201ENST00000468100 304 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 GAPDHP71-201ENST00000511530 1003 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 RN7SKP238-201ENST00000516483 249 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 IGKV2-19-201ENST00000518132 283 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC136777.2-201ENST00000522979 358 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 WBP1LP3-201ENST00000523033 208 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AL845552.1-201ENST00000556820 323 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC091078.2-201ENST00000557145 559 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC091167.5-201ENST00000605689 894 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AP001052.1-201ENST00000626421 99 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 OR11H2-202ENST00000641517 1085 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 CASC19-238ENST00000641523 1558 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC138907.8-201ENST00000623981 2256 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 AC004076.2-201ENST00000620532 3323 ntBASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS29Q9UBQ0 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 RNFT1P3-201ENST00000340898 1052 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 RNA5SP91-201ENST00000390902 119 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 RNGTTP1-201ENST00000420965 728 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 EIF5AP4-201ENST00000441206 465 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 PPIAP27-201ENST00000453800 265 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 RBBP4P1-201ENST00000502424 1276 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC105384.2-201ENST00000508433 640 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 SETP21-201ENST00000514799 892 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC084121.1-201ENST00000533882 835 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC007956.1-201ENST00000555623 542 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 ZNF322P1-201ENST00000568013 1209 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 MIR4776-2-201ENST00000580204 80 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC025857.2-201ENST00000602711 238 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 HIRAP1-201ENST00000605318 787 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC108673.3-201ENST00000609183 335 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms