Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 RNA5SP350-201ENST00000363298 111 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 RNU6-167P-201ENST00000384292 106 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 RN7SKP229-201ENST00000410465 302 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 NDUFS5P5-201ENST00000437256 321 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 GAPDHP23-201ENST00000444823 993 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AL161636.2-201ENST00000445179 927 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AC011476.1-201ENST00000466725 307 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 UBFD1P1-201ENST00000473259 814 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 SCARNA21.2-201ENST00000516600 166 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AC007494.1-201ENST00000562293 760 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AP003072.5-201ENST00000623872 773 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AC090506.2-201ENST00000624521 419 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AC092724.1-201ENST00000624623 3397 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 LINC01616-201ENST00000561816 2280 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
EBF3Q9H4W6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
EBF3Q9H4W6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.34□□□□□ -1.4
EBF3Q9H4W6 AC087516.1-201ENST00000561236 2428 ntBASIC6.34□□□□□ -1.4
EBF3Q9H4W6 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
EBF3Q9H4W6 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.34□□□□□ -1.4
EBF3Q9H4W6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AP000432.2-201ENST00000624164 2048 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 RNF19BPY-201ENST00000458209 1550 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 RNU1-59P-201ENST00000364829 162 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 SNORA43.1-201ENST00000364863 140 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 RPS26P38-201ENST00000414476 348 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC016908.1-201ENST00000442571 1219 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 ZNF619P1-201ENST00000446539 752 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC092967.1-201ENST00000449016 481 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 OR7L1P-201ENST00000456181 380 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 RPL5P16-201ENST00000471467 790 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 PPP1R11P1-201ENST00000486095 376 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 OR52A4P-203ENST00000498233 1014 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 SCARNA18.1-201ENST00000516330 83 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC007448.1-201ENST00000582714 234 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC008555.7-201ENST00000605008 583 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 RPL21P136-201ENST00000605378 396 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC005972.3-201ENST00000606304 481 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC239803.2-201ENST00000610161 430 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 MIR6793-201ENST00000612376 63 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 U1.25-201ENST00000614085 162 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AP005212.4-201ENST00000614206 710 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC024255.1-201ENST00000614376 102 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms