Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC008627.1-201ENST00000517511 1704 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 COX6B1P3-201ENST00000312310 260 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC099677.3-201ENST00000427081 395 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AL663074.2-201ENST00000440621 479 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 OSTCP1-201ENST00000455507 450 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC068228.1-201ENST00000461723 211 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC083795.1-201ENST00000491760 320 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC008629.2-201ENST00000503783 483 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 HNRNPCP1-201ENST00000556181 766 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC008536.1-201ENST00000602872 669 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC239803.2-201ENST00000610161 430 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AL021918.2-201ENST00000613415 194 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AL352984.2-202ENST00000613699 155 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC073488.3-201ENST00000631611 778 ntBASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
UPF3BQ9BZI7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 RN7SKP77-201ENST00000363261 353 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AL031985.1-201ENST00000392713 418 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AL096711.1-201ENST00000404780 554 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 MARK2P12-201ENST00000420129 585 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AC021876.1-201ENST00000425959 359 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 RN7SL269P-201ENST00000467795 305 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 PFN1P6-201ENST00000476786 399 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 PPIAP19-201ENST00000486414 492 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 RN7SKP35-201ENST00000517210 151 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AC078899.1-201ENST00000521432 1185 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AC110056.1-201ENST00000525759 911 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AC233699.1-201ENST00000569955 1168 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 TXNP4-201ENST00000575018 310 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AC005229.3-201ENST00000603438 323 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AL354854.1-201ENST00000455940 1363 ntBASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.04□□□□□ -1.28
UPF3BQ9BZI7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 RPL7P58-201ENST00000402913 758 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 OR2W4P-201ENST00000406496 926 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 RPL35AP3-201ENST00000414680 288 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 Z93019.1-201ENST00000416450 973 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms