Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NPM1P40-201ENST00000412758 733 ntBASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AC139493.1-201ENST00000604368 397 ntBASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 RN7SL570P-201ENST00000484405 292 ntBASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 OR6M2P-201ENST00000529831 871 ntBASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AC092653.1-201ENST00000608509 531 ntBASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 CDC27P1-201ENST00000445384 715 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 RPL32P33-201ENST00000487023 394 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AL109766.1-201ENST00000555080 552 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 RNA5SP335-201ENST00000363817 110 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AL049693.1-201ENST00000402760 611 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 MGAT2P1-201ENST00000449718 797 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 CYCSP42-201ENST00000450823 238 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AC026688.1-201ENST00000520639 1168 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 OR4A40P-201ENST00000533878 948 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AC114947.2-201ENST00000565748 2125 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 MIR4270-201ENST00000581799 70 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AL031320.1-201ENST00000604177 357 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 CAST-202ENST00000325674 3356 ntTSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 SNORA70.4-201ENST00000365509 134 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 SNORA67-201ENST00000384423 137 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 RNU11-6P-201ENST00000391127 133 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 RPL17P36-201ENST00000420302 549 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 ZNF733P-202ENST00000444809 1573 ntBASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSMD1Q96PZ7 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CSMD1Q96PZ7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CSMD1Q96PZ7 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CSMD1Q96PZ7 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CSMD1Q96PZ7 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms