Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 OR5M12P-201ENST00000423388 929 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 TDGF1P1-201ENST00000445734 527 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 VDAC2P4-201ENST00000452925 711 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 RN7SL205P-201ENST00000490174 284 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC021678.3-201ENST00000517893 476 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 OR4H6P-201ENST00000563771 921 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 RN7SL52P-201ENST00000584271 284 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 RN7SL722P-201ENST00000617780 284 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 RN7SL565P-201ENST00000618246 284 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC009704.2-201ENST00000618739 483 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC019050.1-201ENST00000418508 492 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC015977.1-201ENST00000418887 292 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 RN7SL51P-201ENST00000468230 285 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC034236.1-201ENST00000469891 373 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC010857.1-201ENST00000606398 594 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC116631.1-202ENST00000640984 683 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AP000866.6-201ENST00000638898 3579 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AL078621.3-201ENST00000623707 2042 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 RNA5SP479-201ENST00000364858 117 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC007161.1-204ENST00000423039 460 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 RPS23P2-201ENST00000463671 415 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 MIPEPP2-201ENST00000422560 1819 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 COL6A4P1-202ENST00000487147 4317 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 RPL32P3-201ENST00000359025 275 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC097484.1-201ENST00000471148 389 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC100784.1-201ENST00000522790 310 ntBASIC4.54□□□□□ -1.68
VPS13CQ709C8 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
VPS13CQ709C8 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS13CQ709C8 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms