Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AL096711.1-201ENST00000404780 554 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 MTND4P11-201ENST00000417020 1058 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 TRGV5P-201ENST00000419915 354 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 MTND4P15-201ENST00000437913 1033 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 VN1R96P-201ENST00000446052 858 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 MTND6P32-201ENST00000457611 483 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC104629.1-201ENST00000494226 508 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 MAST4-IT1-201ENST00000514241 658 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC007346.1-201ENST00000569208 867 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 RN7SL230P-201ENST00000580835 303 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 MIR4420-201ENST00000583944 77 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 BNIP3P40-201ENST00000596017 556 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AP001267.4-201ENST00000602598 545 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC091167.5-201ENST00000605689 894 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 SNX18P12-201ENST00000624821 759 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC004808.2-201ENST00000627965 773 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC073488.3-201ENST00000631611 778 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 PSG10P-201ENST00000501199 1500 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 THAP12P9-201ENST00000503971 2360 ntBASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZNF549Q6P9A3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 RNA5SP211-201ENST00000365516 117 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 GCNT1P4-201ENST00000404096 329 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 RN7SKP86-201ENST00000410454 332 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 RPL35AP3-201ENST00000414680 288 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AL590762.3-201ENST00000436372 640 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 RPS12P17-201ENST00000438591 377 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AL353662.1-201ENST00000439099 327 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 MTCO3P43-201ENST00000440974 771 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC092349.1-201ENST00000504903 310 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC091874.2-201ENST00000505889 720 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC106806.2-201ENST00000509365 500 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC018797.1-201ENST00000510791 255 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC108103.1-201ENST00000511286 446 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 SNORA26.10-201ENST00000516427 141 ntBASIC5.92□□□□□ -1.46
ZNF549Q6P9A3 RN7SKP35-201ENST00000517210 151 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms