Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42BPAQ5VT25 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 AP002991.2-201ENST00000623807 2801 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 MRRFP1-201ENST00000435941 1675 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 AC007161.1-204ENST00000423039 460 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 H2AFZP6-201ENST00000444403 394 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 AL389915.2-201ENST00000454576 441 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 AC079841.1-201ENST00000481228 950 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 RPS23P1-201ENST00000491662 432 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 RNU6-941P-201ENST00000516346 108 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 MIR2117-201ENST00000516780 80 ntBASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42BPAQ5VT25 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 RN7SKP115-201ENST00000363177 317 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC069307.1-201ENST00000602820 447 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 MIR6748-201ENST00000610433 71 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AL031595.3-201ENST00000624919 14262 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AL662795.2-201ENST00000624252 3706 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC116036.1-201ENST00000412199 367 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 HIGD1AP8-201ENST00000453927 274 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC010245.2-201ENST00000606908 1167 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 AC006206.1-201ENST00000544842 3387 ntBASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CDC42BPAQ5VT25 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 AC023421.1-201ENST00000590535 1785 ntBASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 PWAR1-201ENST00000624188 2414 ntBASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 SNORD8-201ENST00000363915 110 ntBASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 Y_RNA.625-201ENST00000411256 107 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms