Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 LDHBP2-201ENST00000456969 1005 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 AC087672.1-201ENST00000479876 766 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 RN7SL570P-201ENST00000484405 292 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 OR51A1P-201ENST00000511110 946 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
PTCH1Q13635 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 MIR3691-201ENST00000578066 90 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 AC010245.2-201ENST00000606908 1167 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.09□□□□□ -1.11
PTCH1Q13635 AC105105.5-201ENST00000622635 1294 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 AP001784.1-201ENST00000624107 428 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
PTCH1Q13635 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
PTCH1Q13635 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.09□□□□□ -1.11
PTCH1Q13635 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 THAP12P9-201ENST00000503971 2360 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 AC119674.1-213ENST00000641177 1386 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 SNORA11-201ENST00000408789 128 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 HMGB1P32-201ENST00000425971 565 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 VDAC1P6-201ENST00000430062 855 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 AC019185.1-201ENST00000442718 389 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 AC004129.2-201ENST00000457229 287 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 AC079841.1-201ENST00000481228 950 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.08□□□□□ -1.12
PTCH1Q13635 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC8.08□□□□□ -1.12
PTCH1Q13635 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.08□□□□□ -1.12
PTCH1Q13635 AC027334.1-201ENST00000603257 310 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PTCH1Q13635 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTCH1Q13635 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
PTCH1Q13635 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTCH1Q13635 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTCH1Q13635 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.08□□□□□ -1.12
PTCH1Q13635 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.08□□□□□ -1.12
PTCH1Q13635 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTCH1Q13635 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
PTCH1Q13635 AL589993.1-201ENST00000407450 2524 ntBASIC8.07□□□□□ -1.12
PTCH1Q13635 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.07□□□□□ -1.12
PTCH1Q13635 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTCH1Q13635 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PTCH1Q13635 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PTCH1Q13635 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
PTCH1Q13635 AC005042.1-201ENST00000393397 800 ntBASIC8.07□□□□□ -1.12
PTCH1Q13635 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.07□□□□□ -1.12
PTCH1Q13635 AL807761.1-201ENST00000417622 171 ntBASIC8.07□□□□□ -1.12
PTCH1Q13635 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 AL772161.1-201ENST00000439130 476 ntBASIC8.07□□□□□ -1.12
PTCH1Q13635 OR51K1P-201ENST00000510214 950 ntBASIC8.07□□□□□ -1.12
PTCH1Q13635 AC147055.3-201ENST00000510547 851 ntBASIC8.07□□□□□ -1.12
PTCH1Q13635 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.07□□□□□ -1.12
PTCH1Q13635 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 AC012616.1-201ENST00000600294 197 ntBASIC8.07□□□□□ -1.12
PTCH1Q13635 AL596275.2-208ENST00000641192 594 ntBASIC8.07□□□□□ -1.12
PTCH1Q13635 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
PTCH1Q13635 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTCH1Q13635 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PTCH1Q13635 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTCH1Q13635 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTCH1Q13635 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.07□□□□□ -1.12
PTCH1Q13635 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.07□□□□□ -1.12
PTCH1Q13635 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
PTCH1Q13635 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 EIF3EP2-201ENST00000423042 1814 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.06□□□□□ -1.12
PTCH1Q13635 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 SLC35E1P1-201ENST00000419313 864 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 AC019205.1-201ENST00000421830 730 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 RPSAP50-201ENST00000481955 852 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 RN7SKP66-201ENST00000516681 231 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 TPM3P3-201ENST00000521343 354 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 AP000676.2-201ENST00000529711 301 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC8.06□□□□□ -1.12
PTCH1Q13635 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.06□□□□□ -1.12
PTCH1Q13635 AL118522.2-201ENST00000616045 615 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 AC090510.2-201ENST00000617465 629 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 AP001885.1-201ENST00000621658 558 ntBASIC8.06□□□□□ -1.12
PTCH1Q13635 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PTCH1Q13635 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PTCH1Q13635 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTCH1Q13635 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms