Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LTBQ06643 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LTBQ06643 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.66□□□□□ -1.5
LTBQ06643 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 AC096921.2-201ENST00000561507 1916 ntBASIC5.66□□□□□ -1.5
LTBQ06643 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.66□□□□□ -1.5
LTBQ06643 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 AC099654.3-201ENST00000447087 1546 ntBASIC5.66□□□□□ -1.5
LTBQ06643 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LTBQ06643 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LTBQ06643 AC023490.2-201ENST00000359859 470 ntBASIC5.66□□□□□ -1.5
LTBQ06643 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 AL157702.1-201ENST00000398764 426 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AL355143.1-201ENST00000407101 841 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBQ06643 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.66□□□□□ -1.5
LTBQ06643 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBQ06643 OR2L9P-201ENST00000444456 913 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBQ06643 MORF4-201ENST00000447135 971 ntBASIC5.66□□□□□ -1.5
LTBQ06643 HMGB1P7-201ENST00000450921 612 ntBASIC5.66□□□□□ -1.5
LTBQ06643 RN7SL369P-201ENST00000477138 299 ntBASIC5.66□□□□□ -1.5
LTBQ06643 RPL12P31-201ENST00000478433 450 ntBASIC5.66□□□□□ -1.5
LTBQ06643 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.66□□□□□ -1.5
LTBQ06643 AC104629.1-201ENST00000494226 508 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 AP001960.1-201ENST00000506494 658 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AC008628.1-201ENST00000508663 265 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AC010343.2-201ENST00000510162 224 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AC108103.1-201ENST00000511286 446 ntBASIC5.66□□□□□ -1.5
LTBQ06643 RNA5SP206-201ENST00000516703 121 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBQ06643 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBQ06643 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.66□□□□□ -1.5
LTBQ06643 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBQ06643 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.66□□□□□ -1.5
LTBQ06643 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LTBQ06643 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 NANOGNBP2-201ENST00000544753 553 ntBASIC5.66□□□□□ -1.5
LTBQ06643 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.66□□□□□ -1.5
LTBQ06643 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBQ06643 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.66□□□□□ -1.5
LTBQ06643 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.66□□□□□ -1.5
LTBQ06643 AC026898.1-201ENST00000586404 571 ntBASIC5.66□□□□□ -1.5
LTBQ06643 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 AC015849.6-201ENST00000605454 474 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AL512624.1-201ENST00000613638 469 ntBASIC5.66□□□□□ -1.5
LTBQ06643 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 MIR7159-201ENST00000620587 66 ntBASIC5.66□□□□□ -1.5
LTBQ06643 MTCO1P1-201ENST00000624263 1081 ntBASIC5.66□□□□□ -1.5
LTBQ06643 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBQ06643 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
LTBQ06643 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
LTBQ06643 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 AL731532.1-201ENST00000623972 4236 ntBASIC5.66□□□□□ -1.5
LTBQ06643 AL133243.2-201ENST00000610331 1621 ntBASIC5.66□□□□□ -1.5
LTBQ06643 HDAC1P2-201ENST00000453661 1398 ntBASIC5.66□□□□□ -1.5
LTBQ06643 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.66□□□□□ -1.5
LTBQ06643 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBQ06643 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.66□□□□□ -1.5
LTBQ06643 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LTBQ06643 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LTBQ06643 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LTBQ06643 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LTBQ06643 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.65□□□□□ -1.5
LTBQ06643 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.65□□□□□ -1.5
LTBQ06643 AL669831.5-218ENST00000591702 1873 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AC130360.2-201ENST00000533477 1556 ntBASIC5.65□□□□□ -1.5
LTBQ06643 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LTBQ06643 MIR323A-201ENST00000362199 86 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AC017035.1-201ENST00000411999 1115 ntBASIC5.65□□□□□ -1.5
LTBQ06643 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LTBQ06643 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.65□□□□□ -1.5
LTBQ06643 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.65□□□□□ -1.5
LTBQ06643 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LTBQ06643 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms