Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPB1Q06547 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPB1Q06547 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GABPB1Q06547 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.96□□□□□ -1.46
GABPB1Q06547 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPB1Q06547 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPB1Q06547 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPB1Q06547 CDC27P2-201ENST00000425026 1922 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPB1Q06547 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AL034549.2-201ENST00000618285 3373 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 NAMPTP1-201ENST00000440465 2514 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 AC079097.1-201ENST00000512187 1399 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
GABPB1Q06547 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPB1Q06547 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
GABPB1Q06547 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC004817.4-201ENST00000602396 3625 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPB1Q06547 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPB1Q06547 RN7SKP189-201ENST00000365042 330 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
GABPB1Q06547 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC005522.1-201ENST00000395416 346 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 AL034370.1-201ENST00000397254 1590 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPB1Q06547 RPS21P1-201ENST00000434479 247 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 PHBP4-201ENST00000437447 837 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 ARMC8P1-201ENST00000443069 1289 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AL139135.2-201ENST00000445040 433 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.95□□□□□ -1.46
GABPB1Q06547 PCMTD1P3-201ENST00000451824 472 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 UBFD1P1-201ENST00000473259 814 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 RN7SL338P-201ENST00000481467 293 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 RPL38P3-201ENST00000484463 213 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 RN7SL647P-201ENST00000485429 300 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 RN7SL714P-201ENST00000487050 298 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 AC093890.1-201ENST00000502554 540 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GABPB1Q06547 EIF3KP1-201ENST00000513279 656 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 HMGB1P19-201ENST00000517578 577 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.95□□□□□ -1.46
GABPB1Q06547 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC027369.5-201ENST00000533838 755 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 PSMC1P8-201ENST00000536820 1296 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.95□□□□□ -1.46
GABPB1Q06547 MIR5705-201ENST00000579870 89 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPB1Q06547 AC002094.5-201ENST00000623773 629 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPB1Q06547 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 MFSD8-239ENST00000641590 2479 ntBASIC5.95□□□□□ -1.46
GABPB1Q06547 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GABPB1Q06547 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
GABPB1Q06547 BTBD10P1-201ENST00000549824 1352 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 AC123912.3-201ENST00000600907 1367 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 CASC19-221ENST00000641309 1382 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 AL513548.1-201ENST00000562904 1724 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GABPB1Q06547 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
GABPB1Q06547 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GABPB1Q06547 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPB1Q06547 RNU4-81P-201ENST00000363561 144 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 SNORA48.4-201ENST00000391089 134 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 MIR1231-201ENST00000408101 92 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GABPB1Q06547 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AC104333.2-201ENST00000422630 192 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 ELOBP4-201ENST00000423418 296 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 AC244033.1-201ENST00000426826 870 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPB1Q06547 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AC068491.1-201ENST00000449539 1241 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPB1Q06547 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AC097460.2-201ENST00000511857 741 ntBASIC5.94□□□□□ -1.46
GABPB1Q06547 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.94□□□□□ -1.46
GABPB1Q06547 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPB1Q06547 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPB1Q06547 COX6CP11-201ENST00000555293 229 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms