Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MIR4302-201ENST00000638058 60 ntBASIC5.2□□□□□ -1.58
UBA52P62987 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 RPL31P11-201ENST00000426558 1558 ntBASIC5.2□□□□□ -1.58
UBA52P62987 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
UBA52P62987 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.19□□□□□ -1.58
UBA52P62987 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.19□□□□□ -1.58
UBA52P62987 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.19□□□□□ -1.58
UBA52P62987 LYARP1-201ENST00000436977 1501 ntBASIC5.19□□□□□ -1.58
UBA52P62987 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
UBA52P62987 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.19□□□□□ -1.58
UBA52P62987 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.19□□□□□ -1.58
UBA52P62987 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.19□□□□□ -1.58
UBA52P62987 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.19□□□□□ -1.58
UBA52P62987 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
UBA52P62987 HMGN1P20-201ENST00000411849 300 ntBASIC5.19□□□□□ -1.58
UBA52P62987 DHFRP2-201ENST00000414224 547 ntBASIC5.19□□□□□ -1.58
UBA52P62987 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.19□□□□□ -1.58
UBA52P62987 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.19□□□□□ -1.58
UBA52P62987 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.19□□□□□ -1.58
UBA52P62987 MTND2P40-201ENST00000436718 841 ntBASIC5.19□□□□□ -1.58
UBA52P62987 RPL6P30-201ENST00000443382 862 ntBASIC5.19□□□□□ -1.58
UBA52P62987 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.19□□□□□ -1.58
UBA52P62987 AC084754.1-201ENST00000463466 464 ntBASIC5.19□□□□□ -1.58
UBA52P62987 RBBP4P1-201ENST00000502424 1276 ntBASIC5.19□□□□□ -1.58
UBA52P62987 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.19□□□□□ -1.58
UBA52P62987 SNX18P24-201ENST00000505249 671 ntBASIC5.19□□□□□ -1.58
UBA52P62987 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.19□□□□□ -1.58
UBA52P62987 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.19□□□□□ -1.58
UBA52P62987 IGKV1D-22-201ENST00000518953 324 ntBASIC5.19□□□□□ -1.58
UBA52P62987 COX6B1P4-201ENST00000519826 484 ntBASIC5.19□□□□□ -1.58
UBA52P62987 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.19□□□□□ -1.58
UBA52P62987 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.19□□□□□ -1.58
UBA52P62987 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.19□□□□□ -1.58
UBA52P62987 CYCSP38-201ENST00000559840 322 ntBASIC5.19□□□□□ -1.58
UBA52P62987 AC009852.2-201ENST00000567898 485 ntBASIC5.19□□□□□ -1.58
UBA52P62987 MIR3189-201ENST00000578735 73 ntBASIC5.19□□□□□ -1.58
UBA52P62987 MIR132-201ENST00000591554 101 ntBASIC5.19□□□□□ -1.58
UBA52P62987 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.19□□□□□ -1.58
UBA52P62987 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.19□□□□□ -1.58
UBA52P62987 LSM1P2-201ENST00000604911 322 ntBASIC5.19□□□□□ -1.58
UBA52P62987 AP000894.4-201ENST00000610185 483 ntBASIC5.19□□□□□ -1.58
UBA52P62987 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
UBA52P62987 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.19□□□□□ -1.58
UBA52P62987 AC003992.1-201ENST00000635364 557 ntBASIC5.19□□□□□ -1.58
UBA52P62987 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
UBA52P62987 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.19□□□□□ -1.58
UBA52P62987 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
UBA52P62987 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBA52P62987 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.19□□□□□ -1.58
UBA52P62987 AC125336.1-201ENST00000508893 2827 ntBASIC5.19□□□□□ -1.58
UBA52P62987 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.18□□□□□ -1.58
UBA52P62987 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 AC093225.1-201ENST00000506867 1408 ntBASIC5.18□□□□□ -1.58
UBA52P62987 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
UBA52P62987 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.18□□□□□ -1.58
UBA52P62987 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.18□□□□□ -1.58
UBA52P62987 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.18□□□□□ -1.58
UBA52P62987 AL731534.1-201ENST00000434711 269 ntBASIC5.18□□□□□ -1.58
UBA52P62987 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.18□□□□□ -1.58
UBA52P62987 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.18□□□□□ -1.58
UBA52P62987 RPL5P25-201ENST00000441148 775 ntBASIC5.18□□□□□ -1.58
UBA52P62987 AC073072.2-201ENST00000447425 348 ntBASIC5.18□□□□□ -1.58
UBA52P62987 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.18□□□□□ -1.58
UBA52P62987 TRBV5-2-201ENST00000489095 273 ntBASIC5.18□□□□□ -1.58
UBA52P62987 RPL5P14-201ENST00000494197 878 ntBASIC5.18□□□□□ -1.58
UBA52P62987 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.18□□□□□ -1.58
UBA52P62987 MORF4L2P1-201ENST00000503761 858 ntBASIC5.18□□□□□ -1.58
UBA52P62987 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.18□□□□□ -1.58
UBA52P62987 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.18□□□□□ -1.58
UBA52P62987 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.18□□□□□ -1.58
UBA52P62987 AC060780.2-201ENST00000589047 198 ntBASIC5.18□□□□□ -1.58
UBA52P62987 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 AC008521.2-201ENST00000591021 259 ntBASIC5.18□□□□□ -1.58
UBA52P62987 SNORA74.4-201ENST00000607595 199 ntBASIC5.18□□□□□ -1.58
UBA52P62987 AL512356.3-201ENST00000623005 461 ntBASIC5.18□□□□□ -1.58
UBA52P62987 AC138965.3-201ENST00000623875 498 ntBASIC5.18□□□□□ -1.58
UBA52P62987 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 AC096921.2-201ENST00000561507 1916 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 226.8 ms