Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
HOXC8P31273 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HOXC8P31273 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HOXC8P31273 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC8P31273 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC8P31273 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HOXC8P31273 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 RN7SKP162-201ENST00000363605 345 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 SNORD8-201ENST00000363915 110 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 RNU6-316P-201ENST00000391027 107 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 NPM1P38-201ENST00000403835 865 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 HMGB3P24-201ENST00000433260 622 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 AC135999.1-201ENST00000478962 479 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 DUTP7-201ENST00000507982 486 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC8P31273 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC8P31273 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC8P31273 MRPS16P1-201ENST00000523462 412 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 HMGB1P42-201ENST00000532126 553 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 IGBP1P1-201ENST00000554337 1009 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
HOXC8P31273 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC8P31273 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC8P31273 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC8P31273 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC8P31273 uc_338.26-201ENST00000612659 160 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC8P31273 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC8P31273 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 AL031651.1-201ENST00000615357 1438 ntBASIC6.48□□□□□ -1.37
HOXC8P31273 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC8P31273 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC8P31273 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC8P31273 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HOXC8P31273 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC8P31273 Z83820.1-201ENST00000456978 1499 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 AL589993.1-201ENST00000407450 2524 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC8P31273 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXC8P31273 RN7SKP124-201ENST00000364730 341 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXC8P31273 RN7SKP278-201ENST00000410504 342 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC8P31273 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC8P31273 AC015977.1-201ENST00000418887 292 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC8P31273 AC099521.1-201ENST00000482557 334 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 AC009120.1-201ENST00000493458 473 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC8P31273 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC8P31273 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC8P31273 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC8P31273 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC8P31273 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 GARSP1-201ENST00000570895 719 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC8P31273 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 AL450226.2-201ENST00000622913 439 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXC8P31273 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXC8P31273 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC8P31273 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
HOXC8P31273 AC007842.1-201ENST00000597336 2039 ntBASIC6.47□□□□□ -1.37
HOXC8P31273 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
HOXC8P31273 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms