Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CTLA4P16410 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.15□□□□□ -1.58
CTLA4P16410 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CTLA4P16410 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.15□□□□□ -1.59
CTLA4P16410 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.15□□□□□ -1.59
CTLA4P16410 DEFA9P-201ENST00000433042 285 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.15□□□□□ -1.59
CTLA4P16410 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.15□□□□□ -1.59
CTLA4P16410 AC093166.3-201ENST00000448785 303 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 PPIAP27-201ENST00000453800 265 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.15□□□□□ -1.59
CTLA4P16410 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.15□□□□□ -1.59
CTLA4P16410 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.15□□□□□ -1.59
CTLA4P16410 AC093166.4-201ENST00000457867 318 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 AC023194.2-201ENST00000465398 406 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 RNA5SP340-201ENST00000517132 107 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.15□□□□□ -1.59
CTLA4P16410 AC136777.2-201ENST00000522979 358 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 AP003396.4-201ENST00000527574 265 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 AC084121.1-201ENST00000533882 835 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.15□□□□□ -1.59
CTLA4P16410 AL845552.1-201ENST00000556820 323 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 DPPA3P2-202ENST00000557188 1219 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.15□□□□□ -1.59
CTLA4P16410 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.15□□□□□ -1.59
CTLA4P16410 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.15□□□□□ -1.59
CTLA4P16410 AC025857.2-201ENST00000602711 238 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 HIRAP1-201ENST00000605318 787 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 AP001437.1-201ENST00000608783 456 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 MIR6889-201ENST00000613185 59 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 MIR6806-201ENST00000622141 64 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CTLA4P16410 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 AF287957.1-201ENST00000607368 1595 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 CASC19-238ENST00000641523 1558 ntBASIC5.15□□□□□ -1.59
CTLA4P16410 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
CTLA4P16410 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTLA4P16410 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CTLA4P16410 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.14□□□□□ -1.59
CTLA4P16410 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CTLA4P16410 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 AL355834.1-201ENST00000556602 3965 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CTLA4P16410 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 COX6B1P3-201ENST00000312310 260 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.14□□□□□ -1.59
CTLA4P16410 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.14□□□□□ -1.59
CTLA4P16410 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.14□□□□□ -1.59
CTLA4P16410 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.14□□□□□ -1.59
CTLA4P16410 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.14□□□□□ -1.59
CTLA4P16410 CLNS1AP1-201ENST00000435954 682 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 TUBB4BP6-201ENST00000437576 479 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 RPL5P10-201ENST00000445207 894 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 CST12P-201ENST00000457644 362 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.14□□□□□ -1.59
CTLA4P16410 EIF4E2P2-201ENST00000492033 736 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 RBBP4P1-201ENST00000502424 1276 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 SETP21-201ENST00000514799 892 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 SCARNA18.1-201ENST00000516330 83 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.14□□□□□ -1.59
CTLA4P16410 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.14□□□□□ -1.59
CTLA4P16410 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 AC007956.1-201ENST00000555623 542 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 AC093524.1-201ENST00000564266 1094 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 ZNF322P1-201ENST00000568013 1209 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CTLA4P16410 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.14□□□□□ -1.59
CTLA4P16410 AC008507.3-201ENST00000585753 472 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 AL359091.2-201ENST00000609303 556 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 MIR6793-201ENST00000612376 63 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 AL683826.1-201ENST00000624104 627 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 AC027088.4-201ENST00000611559 1947 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CTLA4P16410 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 AC117409.1-201ENST00000470499 1310 ntBASIC5.14□□□□□ -1.59
CTLA4P16410 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CTLA4P16410 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CTLA4P16410 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.14□□□□□ -1.59
CTLA4P16410 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.14□□□□□ -1.59
CTLA4P16410 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTLA4P16410 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms