Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 EIF3EP1-201ENST00000433978 1316 ntBASIC4.88□□□□□ -1.63
CTSDP07339 OR9K1P-202ENST00000641111 3217 ntBASIC4.88□□□□□ -1.63
CTSDP07339 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTSDP07339 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.88□□□□□ -1.63
CTSDP07339 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTSDP07339 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 AC011933.2-201ENST00000578539 2790 ntBASIC4.87□□□□□ -1.63
CTSDP07339 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 RN7SKP184-201ENST00000362348 333 ntBASIC4.87□□□□□ -1.63
CTSDP07339 RNA5SP485-201ENST00000365053 119 ntBASIC4.87□□□□□ -1.63
CTSDP07339 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.87□□□□□ -1.63
CTSDP07339 AC079809.1-201ENST00000415468 276 ntBASIC4.87□□□□□ -1.63
CTSDP07339 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.87□□□□□ -1.63
CTSDP07339 RPL35AP31-201ENST00000418340 337 ntBASIC4.87□□□□□ -1.63
CTSDP07339 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 AL136231.1-201ENST00000429407 730 ntBASIC4.87□□□□□ -1.63
CTSDP07339 OR6R1P-201ENST00000431838 940 ntBASIC4.87□□□□□ -1.63
CTSDP07339 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 AC245291.3-201ENST00000443400 292 ntBASIC4.87□□□□□ -1.63
CTSDP07339 ZNF619P1-201ENST00000446539 752 ntBASIC4.87□□□□□ -1.63
CTSDP07339 RPS18P1-201ENST00000447840 458 ntBASIC4.87□□□□□ -1.63
CTSDP07339 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 RBMY2HP-201ENST00000457961 720 ntBASIC4.87□□□□□ -1.63
CTSDP07339 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 NPM1P28-201ENST00000492269 840 ntBASIC4.87□□□□□ -1.63
CTSDP07339 SNRPCP11-201ENST00000492453 205 ntBASIC4.87□□□□□ -1.63
CTSDP07339 RPSAP51-201ENST00000497462 645 ntBASIC4.87□□□□□ -1.63
CTSDP07339 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.87□□□□□ -1.63
CTSDP07339 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.87□□□□□ -1.63
CTSDP07339 AC135983.3-201ENST00000528049 1226 ntBASIC4.87□□□□□ -1.63
CTSDP07339 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.87□□□□□ -1.63
CTSDP07339 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.87□□□□□ -1.63
CTSDP07339 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 AP001029.2-203ENST00000589795 4910 ntBASIC4.87□□□□□ -1.63
CTSDP07339 FBXL21-201ENST00000297158 1305 ntBASIC4.87□□□□□ -1.63
CTSDP07339 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 AC119674.1-202ENST00000641333 1860 ntBASIC4.87□□□□□ -1.63
CTSDP07339 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
CTSDP07339 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTSDP07339 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CTSDP07339 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTSDP07339 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTSDP07339 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CTSDP07339 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.86□□□□□ -1.63
CTSDP07339 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTSDP07339 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
CTSDP07339 MFSD8-239ENST00000641590 2479 ntBASIC4.86□□□□□ -1.63
CTSDP07339 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.86□□□□□ -1.63
CTSDP07339 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CTSDP07339 GVINP1-202ENST00000531871 7271 ntBASIC4.86□□□□□ -1.63
CTSDP07339 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CTSDP07339 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CTSDP07339 SNORA70.6-201ENST00000383934 134 ntBASIC4.86□□□□□ -1.63
CTSDP07339 RNA5SP187-201ENST00000384400 119 ntBASIC4.86□□□□□ -1.63
CTSDP07339 AL360013.1-201ENST00000419031 858 ntBASIC4.86□□□□□ -1.63
CTSDP07339 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.86□□□□□ -1.63
CTSDP07339 AC128677.1-201ENST00000436016 442 ntBASIC4.86□□□□□ -1.63
CTSDP07339 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.86□□□□□ -1.63
CTSDP07339 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.86□□□□□ -1.63
CTSDP07339 CEACAMP11-201ENST00000455211 583 ntBASIC4.86□□□□□ -1.63
CTSDP07339 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTSDP07339 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTSDP07339 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTSDP07339 AP004609.2-201ENST00000532177 190 ntBASIC4.86□□□□□ -1.63
CTSDP07339 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.86□□□□□ -1.63
CTSDP07339 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms