Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC068726.1-201ENST00000610993 341 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AC048341.3-201ENST00000619323 491 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLPTM1O96005 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLPTM1O96005 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLPTM1O96005 RBPJP6-201ENST00000411556 1431 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC003985.2-201ENST00000562268 1669 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLPTM1O96005 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CLPTM1O96005 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AL359091.1-201ENST00000449048 1734 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLPTM1O96005 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLPTM1O96005 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLPTM1O96005 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC087752.1-201ENST00000391360 558 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 NPM1P10-201ENST00000398310 865 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 RPL5P20-201ENST00000403848 896 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 SNORA77.2-201ENST00000408571 112 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 CBX1P3-201ENST00000413296 527 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AL929472.1-201ENST00000417484 429 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 GAPDHP37-201ENST00000442317 968 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AL445991.1-201ENST00000450381 475 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 GAPDHP14-201ENST00000450472 937 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 KF459542.1-201ENST00000450908 553 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 RSU1P1-201ENST00000453416 441 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
CLPTM1O96005 OR9A1P-202ENST00000484361 945 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC091544.1-201ENST00000484702 348 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 RPL5P14-201ENST00000494197 878 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.66□□□□□ -1.5
CLPTM1O96005 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 RNA5SP230-201ENST00000517039 122 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 BTG1P1-201ENST00000540396 508 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC084824.2-201ENST00000548906 345 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC026956.1-201ENST00000558741 396 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.66□□□□□ -1.5
CLPTM1O96005 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC114477.1-201ENST00000605097 605 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC022400.9-201ENST00000623633 273 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AP003400.6-201ENST00000624698 740 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CLPTM1O96005 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.66□□□□□ -1.5
CLPTM1O96005 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLPTM1O96005 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLPTM1O96005 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLPTM1O96005 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.66□□□□□ -1.5
CLPTM1O96005 AC009962.1-201ENST00000567327 3813 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.66□□□□□ -1.5
CLPTM1O96005 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.66□□□□□ -1.5
CLPTM1O96005 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLPTM1O96005 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
CLPTM1O96005 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.65□□□□□ -1.5
CLPTM1O96005 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.65□□□□□ -1.5
CLPTM1O96005 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.65□□□□□ -1.5
CLPTM1O96005 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLPTM1O96005 AC024587.1-201ENST00000505925 2157 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CLPTM1O96005 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLPTM1O96005 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.65□□□□□ -1.5
CLPTM1O96005 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.65□□□□□ -1.5
CLPTM1O96005 AC093849.1-201ENST00000563631 2209 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLPTM1O96005 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLPTM1O96005 RN7SKP145-201ENST00000363291 303 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.65□□□□□ -1.5
CLPTM1O96005 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLPTM1O96005 MIR191-201ENST00000384873 92 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 AL445238.1-204ENST00000400311 463 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.65□□□□□ -1.5
CLPTM1O96005 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.65□□□□□ -1.5
CLPTM1O96005 FAM183DP-201ENST00000421987 399 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 AC128677.1-201ENST00000436016 442 ntBASIC5.65□□□□□ -1.5
CLPTM1O96005 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.65□□□□□ -1.5
CLPTM1O96005 COL11A2P1-205ENST00000441798 676 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms