Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM38O00635 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM38O00635 AL365181.4-201ENST00000609800 547 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AC005277.2-201ENST00000617898 390 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AC021766.1-201ENST00000624404 741 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 AC073488.6-201ENST00000632293 754 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 LINC02495-203ENST00000636704 242 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TRIM38O00635 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 AC110373.1-201ENST00000505994 3505 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 AC062022.1-201ENST00000451026 1684 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC003985.2-201ENST00000562268 1669 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 CASC19-228ENST00000641414 1684 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM38O00635 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM38O00635 AC010624.4-201ENST00000597606 1351 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM38O00635 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM38O00635 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM38O00635 OR13C3-201ENST00000374781 1108 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 SNORD65-201ENST00000391079 73 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AL050335.1-201ENST00000396909 869 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 AC245884.2-201ENST00000426257 404 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC023141.6-201ENST00000429418 337 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM38O00635 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM38O00635 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM38O00635 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM38O00635 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM38O00635 AC018635.1-201ENST00000468292 1030 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC094085.1-201ENST00000468914 584 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM38O00635 AC015864.1-201ENST00000496512 544 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 AC106806.2-201ENST00000509365 500 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC025768.1-201ENST00000510057 267 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM38O00635 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM38O00635 AL162632.2-201ENST00000553933 399 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM38O00635 RN7SL753P-201ENST00000581238 290 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM38O00635 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM38O00635 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM38O00635 AC073333.2-201ENST00000603589 769 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 MIR6862-1-201ENST00000613016 70 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 MIR6862-2-201ENST00000614755 70 ntBASIC6.36□□□□□ -1.39
TRIM38O00635 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM38O00635 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM38O00635 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM38O00635 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TRIM38O00635 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM38O00635 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TRIM38O00635 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM38O00635 RPL31P11-201ENST00000426558 1558 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 RPL7P58-201ENST00000402913 758 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms