Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL359885.1-201ENST00000415786 903 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 RBMY2AP-201ENST00000445405 1157 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 RBMY2CP-201ENST00000448575 1157 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 RBMY2DP-202ENST00000448881 1157 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC005077.1-201ENST00000449226 375 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 RBMY2BP-202ENST00000451071 1156 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 GEMIN2P1-201ENST00000454246 752 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC093166.4-201ENST00000457867 318 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 RN7SL612P-201ENST00000497704 295 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 PRMT5P1-201ENST00000514351 598 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 IGKV3D-25-201ENST00000519599 235 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC009879.1-201ENST00000520029 839 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC124916.2-201ENST00000604416 224 ntBASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAV27A0A087WT01 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC016739.1-201ENST00000405359 345 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 VN1R21P-201ENST00000426703 765 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AL354893.1-201ENST00000433735 348 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 RPL6P30-201ENST00000443382 862 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 OR7E116P-201ENST00000448529 957 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 MEMO1P4-201ENST00000453590 386 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 OR7E157P-201ENST00000494376 911 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC018797.1-201ENST00000510791 255 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC111000.6-201ENST00000514471 709 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC021146.10-201ENST00000515628 706 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC084824.2-201ENST00000548906 345 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC091078.2-201ENST00000557145 559 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC002519.2-203ENST00000567043 837 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC138207.8-204ENST00000579588 527 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 MIR4776-2-201ENST00000580204 80 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC005244.1-201ENST00000582566 339 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AC092266.1-201ENST00000610958 165 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AL352984.2-201ENST00000611153 546 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 MIR6809-201ENST00000612189 116 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AP001153.1-201ENST00000641024 338 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 AL049634.1-201ENST00000453770 1720 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 QRSL1P1-201ENST00000400977 1540 ntBASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TRAV27A0A087WT01 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRAV27A0A087WT01 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
TRAV27A0A087WT01 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
TRAV27A0A087WT01 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRAV27A0A087WT01 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRAV27A0A087WT01 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 RNFT1P3-201ENST00000340898 1052 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms