Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 BX510359.3-201ENST00000422168 306 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC073464.3-201ENST00000422564 712 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 TUBB4BP6-201ENST00000437576 479 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AL157884.3-201ENST00000448273 1184 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 PPIAP7-201ENST00000454070 489 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 RPL12P31-201ENST00000478433 450 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 RPS14P8-201ENST00000478778 369 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 RN7SL629P-201ENST00000489622 285 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 COX6B1P2-201ENST00000489624 230 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
USP35Q9P2H5 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 RN7SKP248-201ENST00000516278 305 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 RNA5SP271-201ENST00000516700 88 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AP000620.1-201ENST00000527147 504 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC092332.1-201ENST00000563684 829 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC067838.1-201ENST00000606064 577 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC022467.1-201ENST00000614738 749 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC018692.2-201ENST00000624130 348 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USP35Q9P2H5 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USP35Q9P2H5 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USP35Q9P2H5 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 AC018717.1-201ENST00000457712 1505 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USP35Q9P2H5 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USP35Q9P2H5 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 SNORD51.1-201ENST00000365405 77 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 MIR541-201ENST00000401360 84 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC046176.1-201ENST00000435260 1170 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 H3F3BP1-201ENST00000440551 403 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AL590004.3-202ENST00000445883 451 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 VN1R48P-201ENST00000448149 1036 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 VPS25P1-201ENST00000455691 508 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC124945.1-201ENST00000485133 188 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC016180.1-201ENST00000567945 403 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC020978.7-201ENST00000575953 1187 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC012254.5-201ENST00000623573 478 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 Z97989.1-201ENST00000531702 2421 ntBASIC8.63□□□□□ -1.03
USP35Q9P2H5 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
USP35Q9P2H5 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
USP35Q9P2H5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 ZNF402P-201ENST00000404435 3100 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AL357078.2-201ENST00000416486 427 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms