Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 RNU4-24P-201ENST00000364565 139 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 UBBP1-201ENST00000392399 473 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 HMGB3P19-201ENST00000403971 560 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 RN7SKP91-201ENST00000410852 288 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC000089.1-201ENST00000424559 801 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC091390.2-201ENST00000432573 374 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 RPS7P2-201ENST00000435134 607 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AL353706.1-201ENST00000436728 494 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 GAPDHP20-201ENST00000444107 1007 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 MTND2P4-201ENST00000445034 1004 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 RPL7AP71-201ENST00000451120 739 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 USP9YP25-201ENST00000457708 443 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 RN7SL372P-201ENST00000461982 298 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC008379.1-201ENST00000463655 464 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC083806.1-201ENST00000468934 316 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC117395.1-201ENST00000487390 403 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC017007.1-201ENST00000511960 415 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC093878.1-201ENST00000515630 432 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 FXNP1-201ENST00000555153 337 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AL590032.1-201ENST00000604920 252 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC067838.1-201ENST00000606064 577 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AL583856.2-201ENST00000606298 543 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC093673.2-201ENST00000609674 331 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC106782.7-201ENST00000624024 418 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC133555.5-201ENST00000624430 418 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC005858.3-201ENST00000624756 589 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 ZNF402P-201ENST00000404435 3100 ntBASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 ZNF806-201ENST00000438300 1774 ntBASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 AP005139.1-201ENST00000580702 1647 ntBASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.03□□□□□ -1.44
PARPBPQ9NWS1 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms