Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC092121.1-201ENST00000569452 202 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 COX6CP7-201ENST00000597056 208 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 AL096712.1-201ENST00000614561 159 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 OR8G3P-202ENST00000641572 1255 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 AL359955.1-201ENST00000455242 3275 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CISHQ9NSE2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CISHQ9NSE2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 OR2W4P-201ENST00000406496 926 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 AC019205.1-201ENST00000421830 730 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 SUMO2P8-201ENST00000434672 286 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 GAPDHP48-201ENST00000436626 961 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 AC105384.2-201ENST00000508433 640 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 ZNF322P1-201ENST00000568013 1209 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 AL163952.1-202ENST00000569625 600 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 AL365181.4-201ENST00000609800 547 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 AC022919.1-201ENST00000624979 626 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 AC117409.1-201ENST00000470499 1310 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CISHQ9NSE2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CISHQ9NSE2 WDR95P-201ENST00000425638 1542 ntBASIC6.2□□□□□ -1.42
CISHQ9NSE2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 HMGN1P20-201ENST00000411849 300 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AL357752.1-201ENST00000412817 349 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 CRIP1P1-201ENST00000427567 185 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 RPS17P15-201ENST00000475609 349 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC139365.2-201ENST00000517972 253 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AL513327.3-201ENST00000602618 469 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 AL133481.2-203ENST00000607558 139 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 MIR6778-201ENST00000617912 73 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC073342.2-201ENST00000595842 1800 ntBASIC6.19□□□□□ -1.42
CISHQ9NSE2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CISHQ9NSE2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CISHQ9NSE2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms