Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 AC005294.1-201ENST00000355509 281 ntBASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 RMRPP5-201ENST00000411156 267 ntBASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 AL353626.3-201ENST00000413399 657 ntBASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 RPL7L1P9-201ENST00000431298 745 ntBASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 AC090638.1-201ENST00000498296 909 ntBASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 LINC01739-205ENST00000641890 573 ntBASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHANK3Q9BYB0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 AC010132.2-201ENST00000295493 1043 ntBASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 RPL7P56-201ENST00000429441 717 ntBASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 MTCYBP21-201ENST00000443300 1113 ntBASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 AC020898.1-201ENST00000474167 787 ntBASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHANK3Q9BYB0 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 MIR765-201ENST00000390226 114 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AC016027.5-201ENST00000427227 210 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 DSTNP5-201ENST00000427921 523 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 TPT1P12-201ENST00000448968 492 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 TPM3P3-201ENST00000521343 354 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 ATP5J2P6-201ENST00000565203 266 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AC010435.1-201ENST00000623353 1177 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 KYNUP3-201ENST00000574386 1341 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AP004289.1-201ENST00000436307 2205 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 MFSD8-239ENST00000641590 2479 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AC009804.1-201ENST00000400949 179 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 SLC35E1P1-201ENST00000419313 864 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 AC006466.1-201ENST00000438721 289 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 RPL7L1P3-201ENST00000455249 689 ntBASIC7.38□□□□□ -1.23
SHANK3Q9BYB0 RPS29P33-201ENST00000456717 146 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms