Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 AL008582.1-201ENST00000609612 442 ntBASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 AC011755.1-201ENST00000623763 2049 ntBASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 CASC19-246ENST00000641625 1606 ntBASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC28BQ9BUN5 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 EI24P3-201ENST00000399046 1062 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 RN7SKP144-201ENST00000411108 279 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AL691447.1-201ENST00000419456 387 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 NMD3P2-201ENST00000421815 761 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 TCEA1P3-201ENST00000443005 880 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 CXCR2P1-202ENST00000443392 1074 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 RPS23P9-201ENST00000448848 438 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 TMEM97P2-201ENST00000517841 403 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AC135983.3-201ENST00000528049 1226 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AC084851.2-201ENST00000530377 364 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 RN7SL32P-201ENST00000580514 281 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AL162574.1-201ENST00000615702 950 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 MIR6133-201ENST00000617057 108 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 XKRY2-202ENST00000623874 1581 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 XKRY-202ENST00000624960 1581 ntBASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC28BQ9BUN5 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AL360013.1-201ENST00000419031 858 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AC006509.1-201ENST00000420788 634 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 RPL12P12-201ENST00000424633 501 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 HSPE1P16-201ENST00000426640 348 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 NPM1P23-201ENST00000440193 849 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AC016027.4-201ENST00000450866 277 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AC104164.1-201ENST00000460282 590 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 RPL38P3-201ENST00000484463 213 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 ENPP7P11-201ENST00000505915 627 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AC021269.1-201ENST00000526860 705 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms