Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC9.52□□□□□ -0.89
TOPBP1Q92547 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TOPBP1Q92547 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
TOPBP1Q92547 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC9.52□□□□□ -0.89
TOPBP1Q92547 AL391261.1-201ENST00000555712 1479 ntBASIC9.52□□□□□ -0.89
TOPBP1Q92547 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
TOPBP1Q92547 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
TOPBP1Q92547 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TOPBP1Q92547 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TOPBP1Q92547 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.52□□□□□ -0.89
TOPBP1Q92547 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
TOPBP1Q92547 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
TOPBP1Q92547 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TOPBP1Q92547 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
TOPBP1Q92547 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 AC016397.1-201ENST00000412463 242 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 IGLV3-24-201ENST00000517477 197 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 MAL2-208ENST00000523307 556 ntTSL 4 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 MIR132-201ENST00000591554 101 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 WBP1LP8-201ENST00000617401 327 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 AC006213.6-201ENST00000623722 4179 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 PANDAR-201ENST00000629595 1506 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 ADIG-201ENST00000373348 430 ntTSL 2 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 AL049745.1-201ENST00000433953 286 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 AC127381.1-201ENST00000555979 939 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC9.51□□□□□ -0.89
TOPBP1Q92547 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOPBP1Q92547 AC008957.3-201ENST00000624112 2242 ntBASIC9.51□□□□□ -0.89
TOPBP1Q92547 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
TOPBP1Q92547 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
TOPBP1Q92547 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC006058.1-201ENST00000568686 5067 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC018765.1-201ENST00000623357 3446 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC022893.2-201ENST00000564832 3296 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
TOPBP1Q92547 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 RNU4-2-201ENST00000365668 141 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 SNORA67-201ENST00000384423 137 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC104837.2-201ENST00000427236 424 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AL606490.8-201ENST00000441624 319 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC090424.1-201ENST00000535243 736 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
TOPBP1Q92547 AC114947.2-201ENST00000565748 2125 ntBASIC9.5□□□□□ -0.89
TOPBP1Q92547 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 AC002090.1-201ENST00000625000 2138 ntBASIC9.49□□□□□ -0.89
TOPBP1Q92547 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 SNORA16A-201ENST00000384342 137 ntBASIC9.49□□□□□ -0.89
TOPBP1Q92547 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 RPL23AP18-201ENST00000416139 468 ntBASIC9.49□□□□□ -0.89
TOPBP1Q92547 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 AC079075.1-201ENST00000559543 878 ntBASIC9.49□□□□□ -0.89
TOPBP1Q92547 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms