Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 GTF2IP11-201ENST00000526931 420 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AP001858.2-201ENST00000536213 601 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC090236.2-201ENST00000587933 1101 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC139493.1-201ENST00000604368 397 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC010624.4-201ENST00000597606 1351 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC120036.2-201ENST00000509729 1474 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC011455.2-201ENST00000599320 3336 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 PABPC1P8-201ENST00000452851 2086 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AP001002.1-201ENST00000625148 1513 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 OR52B3P-201ENST00000314715 928 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC073464.3-201ENST00000422564 712 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 MTCO1P45-201ENST00000431457 267 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC022336.1-201ENST00000475510 337 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 NPM1P27-201ENST00000502784 830 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 SNORA58-201ENST00000505219 137 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 PCNAP1-201ENST00000505363 709 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC027544.3-201ENST00000535082 757 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC009120.3-201ENST00000563335 499 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 NPIPB1P-202ENST00000588786 828 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AL671309.1-201ENST00000603750 544 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC020765.1-201ENST00000604296 328 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AL591167.1-201ENST00000607321 456 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 OR51C1P-201ENST00000608504 942 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC096708.4-201ENST00000620563 552 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC006249.1-201ENST00000621223 471 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 OR10AB1P-202ENST00000641219 1686 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 AL078595.2-201ENST00000605309 1780 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 DDX6P1-205ENST00000441966 1436 ntBASIC6.25□□□□□ -1.41
HMGB4Q8WW32 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HMGB4Q8WW32 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 RBMY1HP-201ENST00000382759 1389 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AL050335.1-201ENST00000396909 869 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AL096800.1-201ENST00000405326 893 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC245096.1-201ENST00000413104 546 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 RPL35AP31-201ENST00000418340 337 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms